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Epigenomic Consequences of Coding and Noncoding Driver Mutations
Xiaosai Yao1, Manjie Xing2, Wen Fong Ooi1
1Cancer Therapeutics and Stratified Oncology, Genome Institute of Singapore, 60 Biopolis Street, Singapore 138672, Singapore.
Abstract:
Chromatin alterations are integral to the pathogenic process of cancer, as demonstrated by recent discoveries of frequent mutations in chromatin-modifier genes and aberrant DNA methylation states in different cancer types. Progress is being made on elucidating how chromatin alterations, and how proteins catalyzing these alterations, mechanistically contribute to tissue-specific tumorigenesis. In parallel, technologies enabling the genome-wide profiling of histone modifications have revealed the existence of noncoding driver genetic alterations in cancer. In this review, we survey the current knowledge of coding and noncoding cancer drivers, and discuss their impact on the chromatin landscape. Translational implications of these findings for novel cancer therapies are also presented.
Insights
Cancer involves changes in chromatin structure, including mutations in related genes and DNA methylation. This review covers how these alterations drive cancer and their potential for new therapies.
Area of Science:
- Molecular Biology
- Oncology
- Genetics
Background:
- Chromatin alterations are fundamental to cancer development, evidenced by frequent mutations in chromatin-modifier genes.
- Aberrant DNA methylation patterns are observed across various cancer types, highlighting their pathogenic role.
- Recent advances reveal noncoding genetic alterations impacting the cancer epigenome.
Purpose of the Study:
- To review current knowledge on coding and noncoding cancer drivers.
- To elucidate the mechanistic contribution of chromatin alterations to tissue-specific tumorigenesis.
- To discuss the translational implications for developing novel cancer therapies.
Main Methods:
- Review of existing literature on cancer driver genes and chromatin modifications.
- Analysis of genome-wide profiling data for histone modifications.
- Integration of findings on genetic alterations and their impact on the chromatin landscape.
Main Results:
- Chromatin alterations, including mutations and epigenetic changes, are key drivers of cancer.
- Both coding and noncoding genetic alterations significantly impact the chromatin landscape.
- Understanding these mechanisms provides insights into tissue-specific tumorigenesis.
Conclusions:
- Chromatin modifications and genetic drivers play a critical role in cancer pathogenesis.
- The study of chromatin alterations offers promising avenues for novel cancer therapeutic strategies.
- Further research into coding and noncoding drivers will refine our understanding of cancer biology.
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