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Updated: Feb 25, 2026

Genetic Barcoding with Fluorescent Proteins for Multiplexed Applications
Published on: April 14, 2015
Fluorescent Polymer Nanoparticles for Cell Barcoding In Vitro and In Vivo
Bohdan Andreiuk1, Andreas Reisch1, Marion Lindecker1
1Laboratoire de Biophotonique et Pharmacologie, UMR 7213 CNRS, Faculté de Pharmacie, Université de Strasbourg, 74, Route du Rhin, BP 60024, 67401, Illkirch, France.
Developed fluorescent polymer nanoparticles enable long-term, multicolor cell tracking. These biodegradable nanoparticles offer bright, stable cell barcoding for various applications, including in vivo imaging and drug studies.
Area of Science:
- Biotechnology
- Materials Science
- Cell Biology
Background:
- Accurate long-term tracking of living cells is crucial for understanding biological processes.
- Existing cell labeling methods often suffer from photobleaching, aggregation-caused quenching, and limited multicolor capabilities.
Purpose of the Study:
- To develop novel fluorescent polymer nanoparticles for robust, long-term, multicolor cell labeling and tracking.
- To demonstrate the utility of these nanoparticles in various biological applications, including in vitro and in vivo studies.
Main Methods:
- Synthesized biodegradable poly(lactic-co-glycolic acid) nanoparticles loaded with cyanine dyes.
- Utilized bulky fluorinated counterions to prevent aggregation-caused quenching and enhance brightness.
- Developed a method for creating multicolor cell barcodes using RGB mixing of nanoparticles.
- Validated cell barcoding across multiple cell lines and in vivo models.
Main Results:
- Developed ≈40 nm fluorescent nanoparticles that are ≈20-fold brighter than quantum dots.
- Achieved stable multicolor cell barcoding, transmitted through multiple cell generations.
- Enabled simultaneous tracking of co-cultured cells for over two weeks.
- Demonstrated successful in vivo imaging of cancer cells and zebrafish embryo development.
Conclusions:
- Fluorescent polymer nanoparticles provide a versatile and effective platform for multicolor cell labeling and tracking.
- This technology facilitates the study of cell competition, dynamics in complex biological systems, and in vivo processes.
- The approach offers potential for co-localizing multiple functions within cells using structurally similar nanoparticles.
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