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Simplified Reverse Genetics Method to Recover Recombinant Rotaviruses Expressing Reporter Proteins
Published on: April 17, 2020
Reverse Genetics System Demonstrates that Rotavirus Nonstructural Protein NSP6 Is Not Essential for Viral Replication
Satoshi Komoto1, Yuta Kanai2, Saori Fukuda3
1Department of Virology and Parasitology, Fujita Health University School of Medicine, Toyoake, Aichi, Japan satoshik@fujita-hu.ac.jp.
Abstract:
The use of overlapping open reading frames (ORFs) to synthesize more than one unique protein from a single mRNA has been described for several viruses. Segment 11 of the rotavirus genome encodes two nonstructural proteins, NSP5 and NSP6. The NSP6 ORF is present in the vast majority of rotavirus strains, and therefore the NSP6 protein would be expected to have a function in viral replication. However, there is no direct evidence of its function or requirement in the viral replication cycle yet. Here, taking advantage of a recently established plasmid-only-based reverse genetics system that allows rescue of recombinant rotaviruses entirely from cloned cDNAs, we generated NSP6-deficient viruses to directly address its significance in the viral replication cycle. Viable recombinant NSP6-deficient viruses could be engineered. Single-step growth curves and plaque formation of the NSP6-deficient viruses confirmed that NSP6 expression is of limited significance for RVA replication in cell culture, although the NSP6 protein seemed to promote efficient virus growth.IMPORTANCE Rotavirus is one of the most important pathogens of severe diarrhea in young children worldwide. The rotavirus genome, consisting of 11 segments of double-stranded RNA, encodes six structural proteins (VP1 to VP4, VP6, and VP7) and six nonstructural proteins (NSP1 to NSP6). Although specific functions have been ascribed to each of the 12 viral proteins, the role of NSP6 in the viral replication cycle remains unknown. In this study, we demonstrated that the NSP6 protein is not essential for viral replication in cell culture by using a recently developed plasmid-only-based reverse genetics system. This reverse genetics approach will be successfully applied to answer questions of great interest regarding the roles of rotaviral proteins in replication and pathogenicity, which can hardly be addressed by conventional approaches.
Insights
Rotavirus nonstructural protein 6 (NSP6) is not essential for viral replication in cell culture. Researchers used a reverse genetics system to create NSP6-deficient rotaviruses, finding limited impact on virus growth.
Area of Science:
- Virology
- Molecular Biology
- Microbiology
Background:
- Rotavirus is a major cause of severe diarrhea in children globally.
- The rotavirus genome encodes 12 proteins, including nonstructural proteins (NSPs).
- The function of rotavirus nonstructural protein 6 (NSP6) in viral replication is currently unknown.
Purpose of the Study:
- To investigate the significance of NSP6 in the rotavirus replication cycle.
- To determine if NSP6 is essential for rotavirus viability and replication.
- To utilize a novel plasmid-only-based reverse genetics system for rotavirus research.
Main Methods:
- Generation of NSP6-deficient rotaviruses using a plasmid-only reverse genetics system.
- Analysis of viral replication through single-step growth curves.
- Assessment of viral infectivity via plaque formation assays.
Main Results:
- Viable recombinant rotaviruses lacking NSP6 were successfully engineered.
- NSP6-deficient viruses exhibited limited significance for rotavirus replication in cell culture.
- While not essential, NSP6 appeared to promote efficient rotavirus growth.
Conclusions:
- NSP6 is not essential for rotavirus replication in cell culture.
- The developed reverse genetics system is a valuable tool for studying rotavirus protein functions.
- Further research can explore NSP6's role in viral pathogenicity.

