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Screening circular RNA related to chemotherapeutic resistance in breast cancer
Danfeng Gao1, Xiufen Zhang1, Beibei Liu1
1Oncology Institute, The Affiliated Hospital of Jiangnan University, Wuxi 214062, China.
Aim:
We aimed to identify circular RNAs (circRNAs) associated with breast cancer chemoresistance.
Materials & Methods:
CircRNA microarray expression profiles were obtained from Adriamycin (ADM) resistant MCF-7 breast cancer cells (MCF-7/ADM) and parental MCF-7 cells and were validated using quantitative real-time reverse transcription PCR. The expression data were analyzed bioinformatically.
Results:
We detected 3093 circRNAs and identified 18 circRNAs that are differentially expressed between MCF-7/ADM and MCF-7 cells; after validating by quantitative real-time reverse transcription PCR, we predicted the possible miRNAs and potential target genes of the seven upregulated circRNAs using TargetScan and miRanda. The bioinformatics analysis revealed several target genes related to cancer-related signaling pathways. Additionally, we discovered a regulatory role of the circ_0006528-miR-7-5p-Raf1 axis in ADM-resistant breast cancer.
Conclusion:
These results revealed that circRNAs may play a role in breast cancer chemoresistance and that hsa_circ_0006528 might be a promising candidate for further functional analysis.
Insights
Circular RNAs (circRNAs) are linked to breast cancer chemoresistance. Hsa_circ_0006528 shows potential as a therapeutic target for overcoming Adriamycin resistance in breast cancer.
Area of Science:
- Oncology
- Molecular Biology
- Genomics
Background:
- Breast cancer remains a leading cause of cancer-related mortality worldwide.
- Chemoresistance significantly limits the efficacy of standard breast cancer treatments.
- Circular RNAs (circRNAs) are emerging as key regulators in various biological processes, including cancer progression and drug resistance.
Purpose of the Study:
- To identify specific circular RNAs (circRNAs) implicated in breast cancer chemoresistance.
- To investigate the potential role of circRNAs in Adriamycin (ADM) resistance in MCF-7 breast cancer cells.
Main Methods:
- CircRNA expression profiling was performed using microarray analysis on ADM-resistant MCF-7 (MCF-7/ADM) and parental MCF-7 cells.
- Differential circRNA expression was validated using quantitative real-time reverse transcription PCR (qRT-PCR).
- Bioinformatic analyses, including TargetScan and miRanda, were employed to predict miRNA targets and gene networks of upregulated circRNAs.
Main Results:
- A total of 3093 circRNAs were detected, with 18 circRNAs showing differential expression between MCF-7/ADM and MCF-7 cells.
- Seven upregulated circRNAs were identified, and their potential miRNA and target gene interactions were predicted.
- Bioinformatics analysis highlighted target genes involved in cancer-related signaling pathways.
- The circ_0006528-miR-7-5p-Raf1 axis was identified as a potential regulatory mechanism in ADM-resistant breast cancer.
Conclusions:
- Circular RNAs play a significant role in the development of breast cancer chemoresistance.
- Hsa_circ_0006528 demonstrates potential as a biomarker and therapeutic target for overcoming Adriamycin resistance.
- Further functional studies are warranted to elucidate the precise mechanisms of hsa_circ_0006528 in breast cancer chemoresistance.
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