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Updated: Feb 23, 2026

A Method to Study the C924T Polymorphism of the Thromboxane A2 Receptor Gene
Published on: April 1, 2019
Association Between the Lower Extremity Deep Venous Thrombosis, the Warfarin Maintenance Dose, and CYP2C9*3,
1Department of Peripheral Vascular, Beijing University of Chinese Medicine Dongzhimen Hospital , Beijing, China .
Insights
Genetic variations in CYP3A5*3 may increase the risk of lower extremity deep venous thrombosis (LEDVT). These genetic factors, along with CYP2C9*3 and CYP2D6*10, also influence warfarin maintenance dosage.
Area of Science:
- Pharmacogenomics
- Thrombosis Research
- Clinical Genetics
Background:
- Lower extremity deep venous thrombosis (LEDVT) is a significant postsurgical complication.
- Warfarin is a commonly prescribed anticoagulant, but its dosage requires careful management.
- Genetic polymorphisms in drug-metabolizing enzymes can influence drug efficacy and patient outcomes.
Purpose of the Study:
- To investigate the association between CYP2C9*3, CYP2D6*10, and CYP3A5*3 genetic polymorphisms and the risk of LEDVT.
- To explore the relationship between these genetic polymorphisms and the required warfarin maintenance dose in LEDVT patients.
Main Methods:
- A case-control study involving 536 LEDVT patients and 540 controls.
- Genotyping of CYP2C9*3, CYP2D6*10, and CYP3A5*3 alleles using PCR-RFLP.
- Analysis of genotype distributions and haplotype frequencies using SHEsis software.
- Logistic regression analysis to identify risk and protective factors for LEDVT.
Main Results:
- Increased frequency of CYP3A5*3 genotypes (A/G, G/G) and the G allele in the LEDVT group.
- Higher ACG haplotype frequency and lower ACA/ATA haplotype frequencies in LEDVT patients.
- CYP3A5*3 and the ACG haplotype identified as independent risk factors for LEDVT.
- CYP2C9*3, CYP2D6*10, and CYP3A5*3 polymorphisms were linked to warfarin maintenance dose variations.
Conclusions:
- CYP3A5*3 genetic polymorphism is a potential risk factor for LEDVT.
- CYP2C9*3, CYP2D6*10, and CYP3A5*3 genetic variations are associated with warfarin maintenance dosage, highlighting their pharmacogenetic importance.
Objective:
This study explored the association between the CYP2C9*3/CYP2D6*10/CYP3A5*3 genetic polymorphisms with lower extremity deep venous thrombosis (LEDVT) and the warfarin maintenance dose.
Methods:
Five hundred thirty-six patients who were pathologically diagnosed with LEDVT after surgery were included in the LEDVT group. At the same time, 540 patients without LEDVT who underwent surgery were recruited as the control group. Patients were given warfarin at an initial dose of 2.5-3.0 mg. Blood samples were collected to detect the initial and stable international normalized ratio (INR) values. The warfarin maintenance dose was obtained if the INR remained within a range of 2.0-3.0 for 3 consecutive days. The genotype distribution and haplotype analysis of the CYP2C9*3/CYP2D6*10/CYP3A5*3 alleles were analyzed using polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) testing and SHEsis software, respectively. Logistic regression analysis was used to analyze the risk and protective factors for LEDVT.
Results:
The A/G genotypes, G/G genotypes, and G allele of CYP3A5*3 in the LEDVT group were observed with increased frequency compared with the control group. The LEDVT group displayed a higher ACG haplotype frequency, and lower ACA and ATA haplotype frequencies than the control group. Age, diabetes, low-density lipoprotein, CYP3A5*3 and the ACG haplotype were independent risk factors for LEDVT. High-density lipoprotein and the ACA haplotype were independent protective factors for LEDVT. The genotype distributions of the CYP2C9*3, CYP2D6*10, and CYP3A5*3 genetic polymorphisms were associated with the warfarin maintenance dose.
Conclusion:
The CYP3A5*3 genetic polymorphism may be an important risk factor for LEDVT. Moreover, CYP2C9*3, CYP2D6*10, and CYP3A5*3 are associated with the warfarin maintenance dose.
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