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Evaluating and implementing temporal, spatial, and spatio-temporal methods for outbreak detection in a local
Robert W Mathes1, Ramona Lall1, Alison Levin-Rector1
1New York City Department of Health and Mental Hygiene, Queens, New York, United States of America.
Plos One
|September 9, 2017
Summary
New York City
Area of Science:
- Public Health Surveillance
- Epidemiology
- Biostatistics
Background:
- New York City's Department of Health and Mental Hygiene utilizes a syndromic surveillance system since 2001.
- The system employs daily temporal and spatial scan statistics for disease cluster detection.
- Advancements in cluster detection methods necessitate ongoing evaluation.
Purpose of the Study:
- To evaluate the performance of various temporal and spatial/spatio-temporal cluster detection methods.
- To compare algorithms based on sensitivity, specificity, positive predictive value, coherence, and timeliness.
- To assess implementation factors including programming time, run time, and ease of use.
Main Methods:
- Syndromic surveillance data from New York City was spiked with simulated case injections.
- Six temporal and four spatial/spatio-temporal detection algorithms were tested.
- Performance metrics included detection rates, positive predictive value, and operational efficiency.
Main Results:
- Among temporal methods, Holt-Winters exponential smoother showed the highest detection rate (19%) at 95% specificity.
- Spatial scan statistic performed best among spatial/spatio-temporal methods, detecting 3% of injects.
- All tested methods exhibited low positive predictive values (<7%).
Conclusions:
- Current cluster detection methods, including the spatial scan statistic, show limited effectiveness in identifying simulated disease clusters.
- The spatial scan statistic, implemented in SaTScan, remains the most practical for daily analysis due to ease of programming and implementation.
- Further research is needed to improve the sensitivity and specificity of syndromic surveillance detection algorithms.
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