Modelling a Peroxidase-based Optical Biosensor
Related Experiment Video
Updated: Feb 23, 2026

Optical Detection of E. coli Bacteria by Mesoporous Silicon Biosensors
Published on: November 20, 2013
Romas Baronas1, Evelina Gaidamauskait E2, Juozas Kulys3
1Department of Software Engineering, Vilnius University, Naugarduko 24, LT-03225 Vilnius, Lithuania. romas.baronas@mif.vu.lt.
Abstract:
The response of a peroxidase-based optical biosensor was modelled digitally.A mathematical model of the optical biosensor is based on a system of non-linear reaction-diffusion equations. The modelling biosensor comprises two compartments, an enzyme layerand an outer diffusion layer. The digital simulation was carried out using finite differencetechnique. The influence of the substrate concentration as well as of the thickness of both theenzyme and diffusion layers on the biosensor response was investigated. Calculations showedcomplex kinetics of the biosensor response, especially at low concentrations of the peroxidaseand of the hydrogen peroxide.

