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Updated: Feb 22, 2026

Microbiota of Attine Ants' Gardens: Visualizing a Microbial Landscape by Scanning Electron Microscopy
Published on: October 4, 2024
Microbial diversity in an intensively managed landscape is structured by landscape connectivity
James S Griffin1, Nanxi Lu2, Naseer Sangwan3,4
1Department of Chemical and Biological Engineering, Northwestern University, Evanston, IL 60208, USA.
Intensively managed landscapes impact microbial communities. Microbial dispersal is effective within water, soil, and sediment, but not between these environments, with species sorting as the primary driver.
Area of Science:
- Environmental microbiology
- Ecosystem ecology
- Biogeochemistry
Background:
- Intensively managed lands enhance nutrient and particle transport in basins.
- The effects on microbial community assembly at a basin scale remain unclear.
Purpose of the Study:
- To investigate how landscape connectivity and dispersal influence microbial diversity in an agricultural watershed.
- To analyze microbial community structure and interactions within the critical zone (water, soil, sediment).
Main Methods:
- Characterization of soil, sediment, and water microbial communities in the Upper Sangamon River basin.
- Statistical and network analyses to understand community structure and interactions.
- Bayesian source tracking to predict microbial community connectivity.
Main Results:
- Strong microbial connectivity was observed within environments (water, soil, sediment), but negligible connectivity between them.
- Species sorting, driven by media type and environmental parameters, was the dominant factor in community dissimilarity.
- Shared co-occurrence patterns in operational taxonomic unit networks suggest ecologically significant relationships across habitats.
Conclusions:
- Microbial dispersal is successful within, but not between, different environmental media in agricultural watersheds.
- Environmental parameters and habitat type strongly influence microbial community assembly.
- Identified shared microbial associations indicate key ecological interactions within the critical zone.
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