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Efficient parameterization of cardiac action potential models using a genetic algorithm.

Darby I Cairns1, Flavio H Fenton2, E M Cherry1

  • 1School of Mathematical Sciences, Rochester Institute of Technology, Rochester, New York 14623, USA.

Chaos (Woodbury, N.Y.)
|October 2, 2017
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Summary
This summary is machine-generated.

Optimizing mathematical models of cardiac cells is feasible using genetic algorithms. This method efficiently parameterizes complex models, but parameter variability highlights identifiability challenges.

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Area of Science:

  • Computational Biology
  • Biophysics
  • Mathematical Modeling

Background:

  • Mathematical models of cardiac cells are crucial for understanding electrophysiology.
  • Parameter estimation for these complex models is a significant computational challenge.

Purpose of the Study:

  • To demonstrate an efficient method for parameterizing complex cardiac cell models.
  • To assess the performance and limitations of a genetic algorithm for model fitting.

Main Methods:

  • Simultaneous fitting of up to 27 parameters using a genetic algorithm.
  • Application to two flexible phenomenological models of cardiac action potentials.
  • Validation through 'model recovery' and experimental data fitting.

Main Results:

  • Efficient parameterization achieved in 30-40 seconds.
  • Good agreement between model predictions and underlying system dynamics.
  • Significant variability in parameter values, indicating identifiability and sensitivity issues.

Conclusions:

  • Genetic algorithms offer an efficient approach to parameterize cardiac cell models.
  • Model parameter identifiability and sensitivity require careful consideration.
  • Different model structures impact the ease of accurate parameterization.