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Published on: March 30, 2019
Transcriptomic analysis of human non-small lung cancer cells A549 treated by one synthetic curcumin derivative MHMD
1College of Bioengineering; Henan University of Technology, Zhengzhou 450001, China.
Abstract:
In our previous studies, we have identified one curcumin analog MHMD could induce apoptosis of lung cancer cells A549 via extrinsic and intrinsic pathways in our previous studies. But the specific regulatory genes and molecular mechanisms remain poorly understood. Here, the transcriptomic profile of A549 cells was detected with RNA-seq technique after MHMD treatment at 48 h. A total of 16584651 clean data from 21831774 sequence reads were obtained and 80.75% of them could be mapped on the human test genome. 18635 unigenes with the mean length of 4027 bp were finally assembled. 850 up-regulated and 855 down-regulated genes were differently expressed in MHMD-incubated A549 cells, which were involved in many cellular pathways of MHMD-treated A549 cells. Furthermore, the major genes involved in the apoptotic and NSCLC pathways were analyzed. mRNAs of four genes (casp7, p53, tgfa, prkar1b) were validated by RT-PCR, which suggested that MHMD indeed activated the apoptotic pathway of A549 cells.
Insights
The curcumin analog MHMD triggers apoptosis in lung cancer cells by regulating key genes. This study reveals MHMD
Area of Science:
- Molecular Biology
- Cancer Research
- Genomics
Background:
- Curcumin analog MHMD induces apoptosis in A549 lung cancer cells via extrinsic and intrinsic pathways.
- Specific regulatory genes and molecular mechanisms underlying MHMD's action remain unclear.
Purpose of the Study:
- To elucidate the molecular mechanisms and identify regulatory genes involved in MHMD-induced apoptosis of A549 cells.
- To analyze the transcriptomic profile of A549 cells following MHMD treatment.
Main Methods:
- RNA-sequencing (RNA-seq) was employed to analyze the transcriptomic profile of A549 cells after 48 hours of MHMD treatment.
- Bioinformatic analysis was performed to identify differentially expressed genes and enriched pathways.
- Reverse transcription polymerase chain reaction (RT-PCR) was used to validate the expression of key genes.
Main Results:
- RNA-seq analysis yielded 18,635 unigenes, with 850 genes upregulated and 855 genes downregulated in MHMD-treated A549 cells.
- Differentially expressed genes were associated with various cellular pathways, including apoptosis and non-small cell lung cancer (NSCLC) pathways.
- RT-PCR validation confirmed the altered expression of casp7, p53, tgfa, and prkar1b, supporting MHMD's role in apoptosis activation.
Conclusions:
- MHMD treatment significantly alters gene expression profiles in A549 lung cancer cells.
- The study identifies key genes and pathways involved in MHMD-induced apoptosis, providing insights into its anti-cancer mechanisms.
- MHMD demonstrates potential as a therapeutic agent for lung cancer by activating apoptotic pathways.
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