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Deciphering the Structural Effects of Activating EGFR Somatic Mutations with Molecular Dynamics Simulation
Published on: May 20, 2020
Structure-based design and synthesis of 2,4-diaminopyrimidines as EGFR L858R/T790M selective inhibitors for NSCLC
Lingfeng Chen1, Weitao Fu2, Chen Feng2
1School of Chemical Engineering, Nanjing University of Science and Technology, Nanjing, Jiangsu, 210094, China; Chemical Biology Research Center at School of Pharmaceutical Sciences, Wenzhou Medical University, Wenzhou, Zhejiang 325035, China.
Abstract:
Mutated epidermal growth factor receptor (EGFR) is a major driver of non-small cell lung cancer (NSCLC). The EGFRT790M secondary mutation has become a leading cause of clinically-acquired resistance to gefitinib and erlotinib. Herein, we present a structure-based design approach to increase the potency and selectivity of the previously reported reversible EGFR inhibitor 7, at the kinase and cellular levels. Three-step structure-activity relationship exploration led to promising compounds 19e and 19h with unique chemical structure and binding mode from the other third-generation tyrosine kinase inhibitors. In a human NSCLC xenograft model, 19e and 19h exhibited dose-dependent tumor growth suppression without toxicity. These selective inhibitors are promising drug candidates for EGFRT790M-driven NSCLC.
Insights
New drug candidates, 19e and 19h, show promise in treating non-small cell lung cancer (NSCLC) driven by the EGFR T790M mutation. These compounds effectively suppress tumor growth without toxicity, offering a potential new therapy for resistant NSCLC.
Area of Science:
- Oncology
- Medicinal Chemistry
- Molecular Biology
Background:
- Mutated epidermal growth factor receptor (EGFR) drives non-small cell lung cancer (NSCLC).
- The EGFR T790M mutation confers resistance to existing EGFR inhibitors like gefitinib and erlotinib.
- Developing novel inhibitors is crucial for overcoming acquired resistance in NSCLC treatment.
Purpose of the Study:
- To design and synthesize novel, potent, and selective EGFR inhibitors targeting the T790M mutation.
- To explore structure-activity relationships for optimizing inhibitor efficacy.
- To evaluate the anti-cancer activity of new compounds in preclinical models.
Main Methods:
- Structure-based drug design approach.
- Iterative structure-activity relationship (SAR) studies.
- In vitro kinase and cellular assays.
- In vivo efficacy studies using a human NSCLC xenograft model.
Main Results:
- Identified potent and selective EGFR inhibitors, compounds 19e and 19h.
- Compounds 19e and 19h demonstrated a unique binding mode distinct from other third-generation inhibitors.
- In vivo studies showed dose-dependent tumor growth suppression by 19e and 19h without observable toxicity.
Conclusions:
- Compounds 19e and 19h are promising drug candidates for EGFR T790M-mutated NSCLC.
- The structure-based design strategy successfully yielded potent and selective inhibitors.
- These novel inhibitors offer a potential therapeutic strategy for patients resistant to current treatments.
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