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High Throughput Yeast Strain Phenotyping with Droplet-Based RNA Sequencing
Published on: May 21, 2020
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High-Throughput Microfluidics for the Screening of Yeast Libraries
Mingtao Huang1,2, Haakan N Joensson3,4, Jens Nielsen5,6
1Department of Biology and Biological Engineering, Chalmers University of Technology, SE-41296, Gothenburg, Sweden.
Methods in Molecular Biology (Clifton, N.J.)
|November 25, 2017
Summary
High-throughput droplet microfluidic screening enables efficient selection of yeast strains for enhanced protein secretion. This method overcomes limitations of traditional screening for extracellular products, accelerating cell factory development.
Area of Science:
- Synthetic Biology
- Biotechnology
- Microfluidics
Background:
- Cell factory development is crucial for industrial biological production.
- Secreted products simplify downstream processing but complicate strain screening.
- Traditional screening methods struggle with high-throughput identification of desired variants.
Purpose of the Study:
- To present a protocol for high-throughput droplet microfluidic screening.
- To enable efficient screening of yeast libraries for increased protein secretion.
- To adapt droplet microfluidics for various extracellular products.
Main Methods:
- Encapsulating single yeast cells in individual droplets.
- Utilizing droplet microfluidics for high-throughput processing and sorting.
- Overcoming throughput limitations of traditional screening for extracellular phenotypes.
Main Results:
- Demonstrated a protocol for droplet microfluidic screening of yeast.
- Enabled high-throughput screening for higher protein secretion.
- Established a method adaptable for other extracellular products.
Conclusions:
- Droplet microfluidics offers a powerful solution for screening extracellular phenotypes.
- This protocol accelerates the development of engineered yeast strains for industrial applications.
- The method is versatile and applicable to a wide range of secreted products.

