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Related Concept Videos

Maxam-Gilbert Sequencing01:05

Maxam-Gilbert Sequencing

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In the same year as the discovery of the Sanger sequencing method, another group of scientists, Allan Maxam and Walter Gilbert, demonstrated their chemical-cleavage method for DNA sequencing. The Maxam-Gilbert method relies on using different chemicals that can cleave the DNA sequence at specific sites, the separation of resulting DNA fragments of variable size using electrophoresis, and deciphering the DNA sequence from the resulting gel bands.
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Related Experiment Video

Updated: Feb 17, 2026

Comprehensive DNA Methylation Analysis Using a Methyl-CpG-binding Domain Capture-based Method in Chronic Lymphocytic Leukemia Patients
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Methyl-CpG-Binding Domain Sequencing: MBD-seq.

Karolina A Aberg1, Robin F Chan1, Linying Xie1

  • 1Center for Biomarker Research and Precision Medicine, Virginia Commonwealth University, P. O. Box 980533, Richmond, VA, 23298, USA.

Methods in Molecular Biology (Clifton, N.J.)
|December 11, 2017
PubMed
Summary
This summary is machine-generated.

Methylome-wide association studies (MWAS) are crucial for understanding common diseases. Methyl-CpG-binding domain sequencing (MBD-seq) provides a cost-effective method for analyzing the methylome, identifying disease-associated methylation sites.

Keywords:
Affinity-based captureBlood spotsCpGDifferentially methylated regionsHigh-dimensional data analysisMBD-seqMWASMethyl-CpG-binding domainMethylMinerMethylome-wide association studiesRaMWASSequencing

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Area of Science:

  • Epigenetics and Genomics
  • Disease Biomarker Discovery

Background:

  • Limited understanding of the methylome's role in common diseases hinders biomarker identification.
  • Methylome-wide association studies (MWAS) are essential for detecting disease-relevant methylation sites.

Purpose of the Study:

  • To evaluate Methyl-CpG-binding domain sequencing (MBD-seq) as an efficient method for MWAS.
  • To demonstrate the feasibility of MBD-seq for large-scale methylome analysis.

Main Methods:

  • Optimization of the Methyl-CpG-binding domain sequencing (MBD-seq) protocol.
  • Comparison of MBD-seq performance against whole-genome bisulfite sequencing (WGBS).

Main Results:

  • An optimized MBD-seq protocol achieves sensitivity and specificity comparable to WGBS.
  • MBD-seq offers significant cost and time savings compared to WGBS.
  • MBD-seq is economically viable for the sample sizes required for MWAS.

Conclusions:

  • MBD-seq is a powerful and cost-effective tool for comprehensive methylome profiling in MWAS.
  • This method facilitates the discovery of methylation sites associated with common diseases.