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Updated: Feb 17, 2026

Probiotic Studies in Neonatal Mice Using Gavage
Published on: January 27, 2019
Impact of prematurity and nutrition on the developing gut microbiome and preterm infant growth
Alex Grier1, Xing Qiu2, Sanjukta Bandyopadhyay2
1Genomics Research Center, University of Rochester School of Medicine and Dentistry, Rochester, NY, USA.
Insights
Understanding the neonatal gut microbiome is key for preterm infant growth. Nutrition tailored to specific gut microbiota phases can significantly improve growth outcomes in these vulnerable infants.
Area of Science:
- Neonatal microbiome research
- Pediatric nutrition
- Infant growth and development
Background:
- Factors influencing the neonatal gut microbiome are crucial for preterm infant health.
- This study investigates the impact of nutrition and common practices on gut microbiota and growth in preterm infants.
Purpose of the Study:
- To examine the influence of nutrition and common practices on the gut microbiota and growth in preterm infants.
- To identify factors that can guide clinical practices for healthy preterm infant development.
Main Methods:
- Weekly gut microbiota samples were collected from preterm infants (postmenstrual age 24-46 weeks).
- Two models were developed: a categorical model with three microbiota phases (P1, P2, P3) and a two-period model (early/late PMA).
- A phase-based framework was primarily used to analyze associations between microbiota, nutrition, and growth.
Main Results:
- Phase transitions in the gut microbiota were observed, correlating with stool consistency changes.
- The rate of progression through microbiota phases was positively associated with gestational age at birth.
- Delayed transition to the P3 microbiota phase was linked to growth failure, with distinct bacterial metabolic functions identified across phases.
Conclusions:
- The impact of nutrition on infant growth is dependent on the specific gut microbiota phase.
- Phase-specific bacterial metabolic functions were identified.
- Tailoring nutrient intake to microbiota phase holds potential for improving growth outcomes in preterm infants.
Background:
Identification of factors that influence the neonatal gut microbiome is urgently needed to guide clinical practices that support growth of healthy preterm infants. Here, we examined the influence of nutrition and common practices on the gut microbiota and growth in a cohort of preterm infants.
Results:
With weekly gut microbiota samples spanning postmenstrual age (PMA) 24 to 46 weeks, we developed two models to test associations between the microbiota, nutrition and growth: a categorical model with three successive microbiota phases (P1, P2, and P3) and a model with two periods (early and late PMA) defined by microbiota composition and PMA, respectively. The more significant associations with phase led us to use a phase-based framework for the majority of our analyses. Phase transitions were characterized by rapid shifts in the microbiota, with transition out of P1 occurring nearly simultaneously with the change from meconium to normal stool. The rate of phase progression was positively associated with gestational age at birth, and delayed transition to a P3 microbiota was associated with growth failure. We found distinct bacterial metabolic functions in P1-3 and significant associations between nutrition, microbiota phase, and infant growth.
Conclusion:
The phase-dependent impact of nutrition on infant growth along with phase-specific metabolic functions suggests a pioneering potential for improving growth outcomes by tailoring nutrient intake to microbiota phase.
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