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Assessment of Resistance to Tyrosine Kinase Inhibitors by an Interrogation of Signal Transduction Pathways by Antibody Arrays
Published on: September 19, 2018
Evolution, dynamics and dysregulation of kinase signalling
David Ochoa1, David Bradley1, Pedro Beltrao1
1European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Cambridge CB10 1SD, UK.
Recent advances in mass spectrometry reveal rapid evolution of protein kinase target sites. Understanding these changes is key to studying kinase signaling and its role in diseases.
Area of Science:
- Molecular Biology
- Evolutionary Biology
- Biochemistry
Background:
- Protein kinases regulate essential eukaryotic cellular processes.
- Kinase signaling research has advanced significantly with new mass spectrometry techniques.
- Large-scale phosphosite identification and quantification are now possible.
Purpose of the Study:
- To explore the evolutionary dynamics of kinase-substrate interactions.
- To investigate the functional consequences and fitness impact of phosphosite divergence.
- To enhance understanding of how genomic alterations affect signaling pathways in disease.
Main Methods:
- Utilizing advanced mass spectrometry for large-scale phosphosite identification.
- Quantifying phosphosite regulation across various conditions.
- Analyzing evolutionary conservation and divergence rates of kinase targets.
Main Results:
- Kinase substrate specificity is highly conserved across species.
- Target phosphosites exhibit rapid evolutionary divergence.
- The functional impact and fitness relevance of many phosphosites remain largely unknown.
Conclusions:
- Evolutionary analysis of protein kinases offers insights into cellular regulation.
- Understanding phosphosite evolution is crucial for deciphering disease-related genomic alterations.
- Further research is needed to determine the functional significance of divergent phosphosites.
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