Related Experiment Video
Updated: Feb 15, 2026

11:29
miRNA Expression Analyses in Prostate Cancer Clinical Tissues
Published on: September 8, 2015
11.3K
Laser Microdissection of Cellular Compartments for Expression Analyses in Cancer Models
1Division of Genetics, Cancer Research Institute, Kanazawa University, Kanazawa, Japan.
Methods in Molecular Biology (Clifton, N.J.)
|January 12, 2018
Summary
This study introduces laser microdissection to isolate specific cell types from tumor tissues. This method enables detailed analysis of the tumor microenvironment and its role in cancer progression.
Area of Science:
- Oncology
- Molecular Biology
- Cell Biology
Background:
- Tumor microenvironment comprises diverse cells like cancer-associated fibroblasts (CAFs) and tumor-associated macrophages (TAMs).
- Inflammation within the tumor microenvironment significantly influences cancer development and progression.
- Understanding cell-specific interactions is crucial for deciphering tumor biology.
Purpose of the Study:
- To present a protocol for laser microdissection to isolate individual cell types from complex tumor tissues.
- To enable independent analysis of gene expression and protein modifications in specific cellular components of the tumor microenvironment.
Main Methods:
- Laser microdissection for precise isolation of distinct cell populations (e.g., cancer cells, CAFs, TAMs, endothelial cells).
- Application of downstream molecular analyses such as real-time RT-PCR and microarray analysis on isolated cells.
Main Results:
- Demonstrated the feasibility of isolating specific cell types from heterogeneous tumor samples.
- Established a method for obtaining pure cell populations for subsequent molecular profiling.
Conclusions:
- Laser microdissection is an effective technique for dissecting the cellular heterogeneity of the tumor microenvironment.
- This approach facilitates in-depth investigation of cell-cell interactions and their impact on cancer progression.
Keywords:
Cancer modelDNA extractionFrozen sectionLaser microdissectionParaffin-embedded sectionRNA extractionMore Related Videos
Related Concept Videos
Compartment Models: Two-Compartment Model
7.2K
The two-compartment model divides the body into central and peripheral compartments to account for varying blood perfusion rates among organs and tissues, affecting drug distribution. The central compartment includes blood and highly perfused tissues with rapid drug distribution, while the peripheral compartment contains tissues with slower drug distribution. After a single IV bolus dose, the drug concentration is high in plasma and low in tissues. The drug distribution between compartments...
7.2K
Compartment Models: Single-Compartment Model
3.3K
The single-compartment model serves as a simplified representation of the human body. This model assumes that the body functions as a single, well-mixed open compartment. When a drug is administered intravenously, it enters the body and quickly distributes uniformly. The drug then undergoes biotransformation and elimination, ultimately leaving the body. The volume of this compartment is referred to as the apparent volume of distribution into which the drug can uniformly distribute. In this...
3.3K
Three-Compartment Open Model
978
The three-compartment open model is a pharmacokinetic model used to describe the distribution and elimination of drugs following extravascular administration. It comprises a central compartment representing the plasma and two peripheral compartments. The highly perfused peripheral compartment represents organs and tissues with a rich blood supply, such as the liver, kidneys, and lungs. The scarcely perfused peripheral compartment represents tissues with lower blood supply, such as adipose...
978
Two-Compartment Open Model: Overview
597
Multicompartmental models are crucial tools in pharmacokinetics, providing a framework to understand how drugs move within the body. The two-compartment model is a crucial subtype, segmenting the body into central and peripheral compartments. The central compartment represents areas with high blood flow, such as plasma and highly perfused organs like the kidneys and liver, while the peripheral compartment signifies tissues with lower blood flow, like adipose tissue and muscle tissue.
The...
The...
597
Clearance Models: Compartment Models
565
Clearance measures drug elimination from the central compartment, including plasma and highly perfused organs like kidneys and liver. Its calculation varies depending on pharmacokinetic models and administration routes. The one-compartment model, for instance, portrays the pharmacokinetics of polar drugs such as aminoglycoside antibiotics administered intravenously and readily excreted in urine. In this case, clearance is influenced by the terminal rate constant (λz) and the total volume...
565
Mechanistic Models: Overview of Compartment Models
406
Mechanistic models, a category encompassing both physiological and compartmental modeling, differ from empirical models' approaches to incorporating known factors about the systems being modeled. Empirical models describe data with minimal assumptions, while mechanistic models aim to provide a robust description of available data by specifying assumptions and integrating known factors about the system. Compartmental analysis is a key example of a mechanistic model in pharmacokinetics and...
406

