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Published on: August 11, 2015
Transcriptomics Evidence for Common Pathways in Human Major Depressive Disorder and Glioblastoma
Yongfang Xie1, Ling Wang2, Zengyan Xie3
1Institute of Bioinformatics, Chongqing University of Posts and Telecommunications, Chongqing 400065, China. xieyf@cqupt.edu.cn.
Abstract:
Depression as a common complication of brain tumors. Is there a possible common pathogenesis for depression and glioma? The most serious major depressive disorder (MDD) and glioblastoma (GBM) in both diseases are studied, to explore the common pathogenesis between the two diseases. In this article, we first rely on transcriptome data to obtain reliable and useful differentially expressed genes (DEGs) by differential expression analysis. Then, we used the transcriptomics of DEGs to find out and analyze the common pathway of MDD and GBM from three directions. Finally, we determine the important biological pathways that are common to MDD and GBM by statistical knowledge. Our findings provide the first direct transcriptomic evidence that common pathway in two diseases for the common pathogenesis of the human MDD and GBM. Our results provide a new reference methods and values for the study of the pathogenesis of depression and glioblastoma.
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