Spread of Meropenem-Resistant Streptococcus pneumoniae Serotype 15A-ST63 Clone in Japan, 2012-2014

Insights

Meropenem-resistant Streptococcus pneumoniae serotype 15A-ST63 strains emerged in Japan. Resistance appears linked to pbp1a gene recombination, with implications for global health as this strain is not covered by current vaccines.

Area of Science:

  • Microbiology
  • Genomics
  • Vaccinology

Background:

  • Increased incidence of meropenem-resistant Streptococcus pneumoniae serotype 15A-ST63 strains observed in Japan post-vaccine introduction.
  • Serotype 15A is not covered by the 13-valent pneumococcal conjugate vaccine (PCV13).

Purpose of the Study:

  • To characterize the meropenem-resistant serotype 15A-ST63 pneumococcal clone.
  • To investigate the genetic basis of meropenem resistance in these strains.
  • To assess the potential for global spread.

Main Methods:

  • Whole-genome sequencing of Japanese isolates.
  • Comparative genomic analysis with international clones (UK, US, Canada).
  • Recombination site prediction analysis.
  • Detailed analysis of penicillin-binding protein genes (pbp1a, pbp2b).

Main Results:

  • Japanese meropenem-resistant serotype 15A-ST63 strains originated from susceptible strains within Japan.
  • Recombination in pbp1a and pbp2b regions was identified in resistant strains.
  • Meropenem resistance is strongly associated with pbp1a recombination.
  • The identified pbp1a gene is identical to that found in multidrug-resistant serotype 19A-ST320 pneumococci prevalent in the US.

Conclusions:

  • The emergence of meropenem resistance in serotype 15A-ST63 pneumococci in Japan is driven by pbp1a recombination.
  • The genetic similarity to successful international clones raises concerns about potential global dissemination.
  • The lack of serotype 15A coverage in PCV13 necessitates enhanced surveillance and potential vaccine updates.

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