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Updated: Feb 15, 2026

Characterization of a Pathogenic Escherichia coli Strain Derived from Oreochromis spp. Farms Using Whole-Genome Sequencing
Published on: December 23, 2022
Complete Genome Sequence of a blaCTX-M-1-Harboring Escherichia coli Isolate Recovered from Cattle in Germany
Jens A Hammerl1, Alexandra Irrgang2, Mirjam Grobbel2
1German Federal Institute for Risk Assessment (Bundesinstitut für Risikobewertung [BfR]), Department Biological Safety, Unit Epidemiology, Zoonoses and Antimicrobial Resistance, Berlin, Germany jens-andre.hammerl@bfr.bund.de.
Abstract:
We describe here the whole-genome sequence and basic characteristics of Escherichia coli isolate 15-AB01393, recovered from German beef within a national monitoring program in 2015. This isolate was identified as an extended-spectrum-β-lactamase-producing E. coli strain of multilocus sequence type (MLST) ST58 harboring the antimicrobial resistance genes blaCTX-M-1, mph(A), sul2, dfrA5, strA, and strB.
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