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Updated: Feb 15, 2026

Kinase Inhibitor Screening In Self-assembled Human Protein Microarrays
Published on: October 23, 2019
2-Phenylquinazolinones as dual-activity tankyrase-kinase inhibitors
Yves Nkizinkiko1, Jenny Desantis2, Jarkko Koivunen1
1Faculty of Biochemistry and Molecular Medicine & Biocenter Oulu, University of Oulu, Oulu, Finland.
Abstract:
Tankyrases (TNKSs) are enzymes specialized in catalyzing poly-ADP-ribosylation of target proteins. Several studies have validated TNKSs as anti-cancer drug targets due to their regulatory role in Wnt/β-catenin pathway. Recently a lot of effort has been put into developing more potent and selective TNKS inhibitors and optimizing them towards anti-cancer agents. We noticed that some 2-phenylquinazolinones (2-PQs) reported as CDK9 inhibitors were similar to previously published TNKS inhibitors. In this study, we profiled this series of 2-PQs against TNKS and selected kinases that are involved in the Wnt/β-catenin pathway. We found that they were much more potent TNKS inhibitors than they were CDK9/kinase inhibitors. We evaluated the compound selectivity to tankyrases over the ARTD enzyme family and solved co-crystal structures of the compounds with TNKS2. Comparative structure-based studies of the catalytic domain of TNKS2 with selected CDK9 inhibitors and docking studies of the inhibitors with two kinases (CDK9 and Akt) revealed important structural features, which could explain the selectivity of the compounds towards either tankyrases or kinases. We also discovered a compound, which was able to inhibit tankyrases, CDK9 and Akt kinases with equal µM potency.
Insights
This study reveals that 2-phenylquinazolinones (2-PQs) are potent tankyrase (TNKS) inhibitors, offering a new avenue for anti-cancer drug development targeting the Wnt/β-catenin pathway.
Area of Science:
- Biochemistry
- Medicinal Chemistry
- Oncology
Background:
- Tankyrases (TNKSs) are key regulators of the Wnt/β-catenin pathway and validated anti-cancer drug targets.
- Developing potent and selective TNKS inhibitors is crucial for advancing cancer therapeutics.
Purpose of the Study:
- To profile 2-phenylquinazolinones (2-PQs) as potential tankyrase inhibitors.
- To investigate the selectivity of 2-PQs against tankyrases versus other kinases, particularly CDK9 and Akt.
- To elucidate the structural basis for selectivity between tankyrases and kinases.
Main Methods:
- Profiling of 2-PQs against TNKS and Wnt/β-catenin pathway kinases.
- Evaluation of compound selectivity against the ARTD enzyme family.
- Co-crystal structure determination of TNKS2-inhibitor complexes.
- Comparative structure-based analysis and molecular docking studies.
Main Results:
- 2-Phenylquinazolinones (2-PQs) demonstrated significantly higher potency as TNKS inhibitors compared to CDK9 inhibitors.
- Compounds exhibited selectivity for tankyrases over other ARTD family members.
- Structural studies revealed key features governing selectivity for TNKS over kinases like CDK9 and Akt.
- A single compound was identified with equal micromolar potency against TNKS, CDK9, and Akt.
Conclusions:
- 2-Phenylquinazolinones represent a promising class of compounds for targeting tankyrases in cancer therapy.
- Understanding the structural basis of selectivity can guide the design of more effective and specific anti-cancer agents.
- The identified multi-kinase inhibitor warrants further investigation for its therapeutic potential.
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