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Updated: Feb 14, 2026

In Situ Characterization of Shewanella oneidensis MR1 Biofilms by SALVI and ToF-SIMS
Published on: August 18, 2017
Redox Sensing within the Genus Shewanella
Howard W Harris1, Irene Sánchez-Andrea2, Jeffrey S McLean3,4
1Department of Earth Sciences, Biological Sciences and Physics, University of Southern California, Los Angeles, CA, United States.
Shewanella bacteria congregate around minerals using extracellular electron transport and chemotaxis genes. Different strains show varied mineral preferences linked to their natural habitats.
Area of Science:
- Microbiology and Microbial Ecology
- Biogeochemistry
- Bacterial Physiology
Background:
- Congregation, a novel bacterial behavior, is defined as cell accumulation around insoluble electron acceptors (IEA) in *Shewanella oneidensis* MR-1.
- This behavior involves coordinated 'run-and-reversal' swimming events, modulated by swimming speed and direction.
- Extracellular electron transport (EET) via outer membrane cytochromes is hypothesized to enable cells to sense their surroundings.
Purpose of the Study:
- To investigate congregation and attachment behaviors in various *Shewanella* strains beyond MR-1.
- To identify genetic factors, specifically EET and chemotaxis genes, correlated with congregation ability.
- To explore strain-specific preferences for different insoluble electron acceptors.
Main Methods:
- Screened wild-type *S. oneidensis* MR-1, deletion mutants, and eight other *Shewanella* strains for congregation.
- Employed specialized cell-tracking techniques to monitor bacterial behavior.
- Utilized a novel cell accumulation after photo-bleaching (CAAP) confocal microscopy technique.
Main Results:
- A strong correlation was found between MR-1's mineral accumulation and the presence of key EET genes (*mtrBC/omcA*) and methyl-accepting protein (MCP) genes with Cache domains.
- *Shewanella putrefaciens* CN32, *S. sp.* ANA-3, and *S. loihica* PV-4 congregated around both Fe(OH)3 and MnO2.
- Other strains exhibited specific mineral preferences (e.g., W3-18-1 for Fe(OH)3, SB2B for MnO2) aligning with their isolation environments.
Conclusions:
- The ability to congregate is linked to specific extracellular electron transport and chemotaxis genes in *Shewanella*.
- Different *Shewanella* species display distinct preferences for insoluble electron acceptors, influenced by their ecological niches.
- This study expands the understanding of *Shewanella* congregation behavior across multiple strains and highlights environmental adaptation.
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