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A broad-range PCR technique for the diagnosis of infective endocarditis
Ines Boujelben1, Radhouane Gdoura2, Adnane Hammami1
1Hospital Sfax, Department of Microbiology and Research Laboratory "Microorganismes et Pathologie Humaine" Habib Bourguiba, Sfax, Tunisia.
Abstract:
Infective endocarditis (IE) remains a severe and potentially fatal disease demanding sophisticated diagnostic strategies for detection of the causative microorganisms. The aim of the present study was to develop a broad-range 16S ribosomal RNA gene polymerase chain reaction in the routine diagnostic of IE for the early diagnosis of fatal disease. A broad-range PCR technique was selected and evaluated in terms of its efficiency in the diagnosis of endocarditis using 19 heart valves from patients undergoing cardiovascular surgeries at the Habib Bourguiba Hospital of Sfax, Tunisia, on the grounds of suspected IE. The results demonstrated the efficiency of this technique particularly in cases involving a limited number of bacteria since it helped to increase detection sensitivity. The technique proved to be efficient, particularly, in the bacteriological diagnosis of IE in contexts involving negative results from conventional culture methods and other contexts involving bacterial species that were not amenable to identification by phenotypic investigations. Indeed, the sequencing of the partial 16S ribosomal RNA gene revealed the presence of Bartonella henselae, Enterobacter sp., and Streptococcus pyogenes in three heart valves with the negative culture. It should be noted that the results obtained from the polymerase chain reaction-sequencing identification applied to the heart valve and the strain isolated from the same tissue were not consistent with the ones found by the conventional microbiological methods in the case of IE caused by Gemella morbillorum. In fact, the results from the molecular identification revealed the presence of Lactobacillus jensenii. Overall, the results have revealed that the proposed method is sensitive, reliable and might open promising opportunities for the early diagnosis of IE.
Insights
A new broad-range 16S ribosomal RNA gene polymerase chain reaction (PCR) enhances infective endocarditis (IE) diagnosis. This sensitive molecular method improves detection, especially for difficult-to-culture bacteria, aiding early identification of this severe disease.
Area of Science:
- Cardiovascular Medicine
- Infectious Diseases
- Molecular Biology
Background:
- Infective endocarditis (IE) is a severe, often fatal infection requiring accurate microbial detection.
- Conventional diagnostic methods for IE can be limited, particularly with low bacterial loads or unusual pathogens.
Purpose of the Study:
- To develop and evaluate a broad-range 16S ribosomal RNA gene polymerase chain reaction (PCR) for routine IE diagnosis.
- To improve the early and sensitive detection of causative microorganisms in suspected IE cases.
Main Methods:
- A broad-range PCR technique targeting the 16S ribosomal RNA gene was employed.
- The method was tested on 19 heart valve samples from patients with suspected IE.
- Sequencing was used to identify microbial species detected by PCR.
Main Results:
- The PCR technique demonstrated high sensitivity, particularly for detecting low bacterial numbers.
- It proved effective in diagnosing IE when conventional cultures were negative.
- Molecular identification revealed pathogens like Bartonella henselae, Enterobacter sp., and Streptococcus pyogenes in culture-negative samples.
- Discrepancies were noted between PCR sequencing and conventional methods for Gemella morbillorum, with PCR identifying Lactobacillus jensenii.
Conclusions:
- The broad-range 16S rRNA gene PCR is a sensitive and reliable method for IE diagnosis.
- This molecular approach offers promising opportunities for the early detection of IE, especially in challenging cases.
- The technique aids in identifying difficult-to-culture or phenotypically unidentifiable bacteria in endocarditis.
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