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Is ZFP57 binding to H19/IGF2:IG-DMR affected in Silver-Russell syndrome?
Angela Sparago1, Flavia Cerrato1, Andrea Riccio1,2
11Dipartimento di Scienze e Tecnologie Ambientali Biologiche e Farmaceutiche, Università degli Studi della Campania "Luigi Vanvitelli", Caserta, Italy.
Background:
Loss of paternal methylation (LOM) of the H19/IGF2 intergenic differentially methylated region (H19/IGF2:IG-DMR) causes alteration of H19/IGF2 imprinting and Silver-Russell syndrome (SRS). Recently, internal deletions of the H19/IGF2:IG-DMR have been associated with LOM and SRS when present on the paternal chromosome. In contrast, previously described deletions, most of which cause gain of methylation (GOM) and Beckwith-Wiedemann syndrome (BWS) on maternal transmission, were consistently associated with normal methylation and phenotype if paternally inherited.
Presentation Of The Hypothesis:
The presence of several target sites (ZTSs) and three demonstrated binding regions (BRs) for the imprinting factor ZFP57 in the H19/IGF2:IG-DMR suggest the involvement of this factor in the maintenance of methylation of this locus. By comparing the extension of the H19/IGF2:IG-DMR deletions with the binding profile of ZFP57, we propose that the effect of the deletions on DNA methylation and clinical phenotype is dependent on their interference with ZFP57 binding. Indeed, deletions strongly affecting a ZFP57 BR result in LOM and SRS, while deletions preserving a significant number of ZFPs in each BR do not alter methylation and are associated with normal phenotype.
Testing The Hypothesis:
The generation of transgenic mouse lines in which the endogenous H19/IGF2:IG-DMR is replaced by the human orthologous locus including the three ZFP57 BRs or their mutant versions will allow to test the role of ZFP57 binding in imprinted methylation and growth phenotype.
Implications Of The Hypothesis:
Similarly to what is proposed for maternally inherited BWS mutations and CTCF and OCT4/SOX2 binding, we suggest that deletions of the H19/IGF2:IG-DMR result in SRS with LOM if ZFP57 binding on the paternal chromosome is affected.
Insights
Deletions in the H19/IGF2:IG-DMR region can cause Silver-Russell syndrome (SRS) by disrupting ZFP57 binding and leading to loss of methylation (LOM). The extent of deletion determines the impact on DNA methylation and phenotype.
Area of Science:
- Genetics
- Epigenetics
- Developmental Biology
Background:
- Loss of paternal methylation (LOM) at the H19/IGF2:IG-DMR is linked to Silver-Russell syndrome (SRS).
- Internal deletions within H19/IGF2:IG-DMR are associated with LOM and SRS on paternal inheritance.
- Previously described deletions causing Beckwith-Wiedemann syndrome (BWS) on maternal inheritance showed normal methylation and phenotype upon paternal inheritance.
Purpose of the Study:
- To investigate the role of ZFP57 binding in maintaining H19/IGF2 imprinting.
- To determine if deletions affecting ZFP57 binding sites cause LOM and SRS.
Main Methods:
- Comparative analysis of H19/IGF2:IG-DMR deletion extents with ZFP57 binding profiles.
- Hypothesizing the impact of deletions based on interference with ZFP57 binding.
Main Results:
- Deletions significantly affecting ZFP57 binding regions result in LOM and SRS.
- Deletions preserving ZFP57 binding sites do not alter methylation or phenotype.
Conclusions:
- The effect of H19/IGF2:IG-DMR deletions on DNA methylation and phenotype is dependent on ZFP57 binding.
- Disruption of ZFP57 binding on the paternal chromosome by deletions leads to SRS with LOM.
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