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Related Concept Videos

Computed Tomography01:10

Computed Tomography

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Tomography refers to imaging by sections. Computed tomography (CT) is a non-invasive imaging technique that uses computers to analyze several cross-sectional X-rays to reveal minute details about structures in the body.
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Interference is a characteristic phenomenon exhibited by waves. When two electromagnetic waves interact with their peaks and troughs coinciding, a resulting wave with enhanced amplitude is produced. This is known as constructive interference. In this case, the two waves interacting are in phase with each other.
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DefinitionComputed Tomography (CT) of the genitourinary (GU) tract is a non-invasive imaging modality that utilizes X-rays and computer processing to generate detailed cross-sectional images of the urinary system, encompassing the kidneys, ureters, bladder, and adjacent structures such as the adrenal glands.PurposeCT scans of the GU tract serve several diagnostic and therapeutic purposes, including:Diagnosis of Urinary Tract Diseases: Detects kidney stones, tumors, cysts, and congenital...
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Real-time reverse transcription-polymerase chain reaction, or Real-time RT-PCR, is an analytical tool used to determine the expression level of target genes. The method involves converting mRNA to complementary DNA with the help of an enzyme known as reverse transcriptase, followed by the PCR amplification of the cDNA. These two processes can be performed simultaneously in a single tube or separately as a two-step reaction.
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X-ray diffraction or XRD is an analytical tool that utilizes X-rays to study ordered structures such as crystalline organic and inorganic samples, polycrystalline materials, proteins, carbohydrates, and drugs.
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Real-time diffraction computed tomography data reduction.

J Kieffer1, S Petitdemange1, T Vincent1

  • 1ESRF - The European Synchrotron, CS40220, 38043 Grenoble Cedex 9, France.

Journal of Synchrotron Radiation
|March 1, 2018
PubMed
Summary
This summary is machine-generated.

This study benchmarks diffraction imaging data analysis and proposes GPU-accelerated techniques for real-time data reduction. This advancement aims to overcome current limitations in high-speed X-ray imaging experiments.

Keywords:
FabIOPilatus detectorazimuthal integrationdiffraction imagingimage compressionpowder diffractionpyFAIsilx

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Area of Science:

  • Materials Science
  • Crystallography
  • X-ray Imaging

Background:

  • Diffraction imaging utilizes crystallographic data (cell parameters, orientation) for pixel-by-pixel image creation.
  • Current synchrotron X-ray sources and detectors enable rapid data acquisition, but real-time data reduction is a bottleneck.
  • Existing data analysis pipelines struggle to keep pace with the high data rates.

Purpose of the Study:

  • To benchmark the performance of a standard data analysis pipeline for diffraction imaging.
  • To propose novel, computationally efficient methods for real-time data reduction.
  • To leverage graphics processing units (GPUs) for accelerated decoding of crystallographic information file (CIF) binary images.

Main Methods:

  • Benchmarking of a typical diffraction imaging data analysis pipeline.
  • Development and testing of GPU-accelerated algorithms for decoding CIF binary data.
  • Real-time data reduction strategies using high-performance computing.

Main Results:

  • The study quantifies the performance limitations of current diffraction imaging data analysis pipelines.
  • Proposed GPU-based techniques demonstrate potential for significant acceleration of data decoding.
  • Feasibility of real-time data reduction for diffraction imaging experiments is shown.

Conclusions:

  • Real-time data reduction is achievable for diffraction imaging experiments with optimized computational strategies.
  • GPU acceleration offers a disruptive solution to current data transfer and processing bottlenecks.
  • These advancements will enhance the efficiency and scope of synchrotron-based X-ray imaging research.