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Published on: December 26, 2016
A multiplatform approach identifies miR-152-3p as a common epigenetically regulated onco-suppressor in prostate
João Ramalho-Carvalho1,2,3,4, Céline S Gonçalves5,6, Inês Graça1
11Cancer Biology & Epigenetics Group - Research Center (CI-IPOP), Portuguese Oncology Institute of Porto (IPO Porto), F Bdg, 1st floor, Rua Dr António Bernardino de Almeida, 4200-072 Porto, Portugal.
Background:
Prostate cancer (PCa) is a major cause of morbidity and mortality in men worldwide. MicroRNAs are globally downregulated in PCa, especially in poorly differentiated tumors. Nonetheless, the underlying mechanisms are still elusive. Herein, using combined analysis of microRNAs expression and genomewide DNA methylation, we aimed to identify epigenetically downregulated microRNAs in PCa.
Results:
We found that miR-152-3p was underexpressed in PCa and that lower expression levels were associated with promoter hypermethylation in accordance with TCGA dataset analysis. Functional in vitro assays suggest that miR-152-3p suppresses cell viability and invasion potential, whereas it promotes cell cycle arrest at S and G2/M phases. Additionally, miR-152-3p expression was associated with longer disease-free survival in PCa patients from TCGA. Finally, TMEM97, which is overexpressed in PCa, was identified as a novel miR-152-3p target gene.
Conclusions:
Our findings demonstrate the advantages of using a combinatory approach to identify microRNAs downregulated due to aberrant promoter methylation. MiR-152-3p downregulation and promoter methylation was found to be prevalent in primary PCa, which impairs its role in control of cell viability, cell cycle regulation and invasion.
Insights
This study identifies miR-152-3p as a key microRNA downregulated in prostate cancer (PCa) due to DNA methylation. Its restoration may offer a new therapeutic strategy for PCa treatment.
Area of Science:
- Oncology
- Molecular Biology
- Epigenetics
Background:
- Prostate cancer (PCa) is a significant global health concern for men.
- MicroRNAs are globally downregulated in PCa, particularly in aggressive tumors, with mechanisms largely unknown.
- Investigating epigenetic regulation of microRNAs in PCa is crucial.
Purpose of the Study:
- To identify epigenetically downregulated microRNAs in prostate cancer.
- To elucidate the role of DNA methylation in microRNA dysregulation in PCa.
- To explore the functional impact of identified microRNAs in PCa progression.
Main Methods:
- Combined analysis of microRNA expression and whole-genome DNA methylation data.
- Utilized TCGA dataset for validation of microRNA expression and methylation correlation.
- Performed in vitro functional assays to assess the biological effects of miR-152-3p.
Main Results:
- MiR-152-3p was found to be underexpressed in PCa, correlating with promoter hypermethylation.
- In vitro studies showed miR-152-3p suppresses cell viability and invasion while promoting cell cycle arrest.
- TMEM97 was identified as a novel target gene of miR-152-3p, and it is overexpressed in PCa.
Conclusions:
- A combined approach effectively identifies microRNAs downregulated by aberrant promoter methylation.
- MiR-152-3p downregulation and hypermethylation are prevalent in primary PCa.
- Restoring miR-152-3p function may be a potential therapeutic strategy for PCa by targeting cell viability, cycle, and invasion.
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