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Enhanced Sample Multiplexing of Tissues Using Combined Precursor Isotopic Labeling and Isobaric Tagging cPILOT
Published on: May 1, 2017
Multiplexed Isobaric Tag-Based Profiling of Seven Murine Tissues Following In Vivo Nicotine Treatment Using a
Joao A Paulo1, Mark P Jedrychowski1,2, Edward T Chouchani1,2
1Department of Cell Biology, Harvard Medical School, Boston, MA, 02115, USA.
Abstract:
Nicotine is a major addictive compound in tobacco and a component of smoking-related products, such as e-cigarettes. Once internalized, nicotine can perturb many cellular pathways and can induce alterations in proteins across different cell types; however, the mechanisms thereof remain undetermined. The authors hypothesize that both tissue-specific and global protein abundance alterations result from nicotine exposure. Presented here is the first proteomic profiling of multiple tissues from mice treated orally with nicotine. Proteins extracted from seven tissues (brain, heart, kidney, liver, lung, pancreas, and spleen) from treated (n = 5) and untreated control (n = 5) mice are assembled into a TMT10-plex experiment. A minimalistic proteomics strategy is employed using TMT reagents efficiently and centrifugation-based reversed-phase columns to streamline sample preparation. Combined, over 11 000 non-redundant proteins from over 138 000 different peptides are quantified in seven TMT10-plex experiments. Between 7 and 126 proteins are significantly altered in tissues from nicotine-exposed mice, 11 which are altered in two or more tissues. Our data showcase the vast extent of nicotine exposure across murine tissue.
Insights
Nicotine exposure alters protein levels across multiple organs in mice. This study provides the first proteomic analysis of nicotine
Area of Science:
- Proteomics
- Toxicology
- Biochemistry
Background:
- Nicotine, a primary addictive component in tobacco and e-cigarettes, is known to affect cellular pathways.
- The precise mechanisms by which nicotine induces protein alterations across various cell types remain largely undetermined.
- Understanding these mechanisms is crucial for assessing the health impacts of nicotine exposure.
Purpose of the Study:
- To investigate the effects of oral nicotine administration on protein abundance across multiple tissues in a murine model.
- To identify tissue-specific and global protein alterations resulting from nicotine exposure.
- To establish a comprehensive proteomic profile of nicotine's impact on different organs.
Main Methods:
- Proteomic profiling of seven tissues (brain, heart, kidney, liver, lung, pancreas, spleen) from nicotine-treated and control mice.
- Utilized TMT10-plex technology for efficient multiplexed quantification of proteins.
- Employed a streamlined sample preparation protocol involving TMT reagents and centrifugation-based reversed-phase columns.
Main Results:
- Quantified over 11,000 non-redundant proteins and 138,000 peptides across seven tissues.
- Identified significant alterations in protein abundance in tissues from nicotine-exposed mice, ranging from 7 to 126 proteins per tissue.
- Discovered 11 proteins that were significantly altered in two or more tissues, indicating a systemic effect of nicotine.
Conclusions:
- Nicotine exposure induces widespread changes in protein abundance across multiple murine tissues.
- The proteomic data demonstrate a significant systemic impact of nicotine, affecting various organs.
- This study provides foundational proteomic insights into the molecular consequences of nicotine exposure.
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