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Updated: Feb 10, 2026

Design and Development of a Model to Study the Effect of Supplemental Oxygen on the Cystic Fibrosis Airway Microbiome
Published on: August 3, 2021
Microbial Interactions in the Cystic Fibrosis Airway.
Ann M Granchelli1, Frederick R Adler2,3,4, Ruth H Keogh5
1The Adult Cystic Fibrosis Center, Division of Respiratory, Critical Care and Occupational Pulmonary Medicine, Department of Internal Medicine, University of Utah, Salt Lake City, Utah, USA.
Interactions between airway microbes in cystic fibrosis (CF) impact persistence and outcomes. Methicillin-sensitive Staphylococcus aureus may inhibit Pseudomonas aeruginosa, potentially slowing CF lung disease progression.
Area of Science:
- Microbiology and Immunology
- Infectious Diseases
- Pulmonology
Background:
- Cystic fibrosis (CF) airway infections involve complex microbial interactions.
- Understanding these interactions is crucial for optimizing clinical management and treatment strategies in CF patients.
Purpose of the Study:
- To investigate the longitudinal associations between common airway organisms in cystic fibrosis patients.
- To determine how the presence of one organism influences the subsequent presence of others in the CF airway ecosystem.
Main Methods:
- Utilized generalized estimating equations to model logistic regression on 2-year patient cohorts from the Cystic Fibrosis Foundation Patient Registry (2003-2011).
- Analyzed sputum culture data from 28,042 patients (aged 6+) across 257 U.S. care centers, covering 538,458 cultures.
- Adjusted models for clinical characteristics and tested sensitivity to CF-specific treatments.
Main Results:
- Methicillin-sensitive Staphylococcus aureus (MSSA) negatively associated with subsequent Pseudomonas aeruginosa.
- P. aeruginosa negatively associated with Burkholderia cepacia complex, Achromobacter xylosoxidans, and Stenotrophomonas maltophilia.
- B. cepacia complex negatively associated with all other studied bacteria and Aspergillus species; P. aeruginosa, B. cepacia complex, and S. maltophilia positively associated with Aspergillus species.
Conclusions:
- Microbial organisms in the CF airway exhibit significant interactions that influence their persistence and potentially clinical outcomes.
- MSSA's inhibition of P. aeruginosa may delay CF lung disease progression.
- P. aeruginosa and B. cepacia complex may reduce airway biodiversity, potentially exacerbating lung disease.
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