Inductive and Selective Effects of GSK3 and MEK Inhibition on Nanog Heterogeneity in Embryonic Stem Cells
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Updated: Feb 10, 2026

Derivation of Hematopoietic Stem Cells from Murine Embryonic Stem Cells
Published on: February 25, 2007
Simon Hastreiter1, Stavroula Skylaki1, Dirk Loeffler1
1Department of Biosystems Science and Engineering, ETH Zurich, 4058 Basel, Switzerland; Research Unit Stem Cell Dynamics, Helmholtz Zentrum München, 85764 Neuherberg, Germany.
Abstract:
Embryonic stem cells (ESCs) display heterogeneous expression of pluripotency factors such as Nanog when cultured with serum and leukemia inhibitory factor (LIF). In contrast, dual inhibition of the signaling kinases GSK3 and MEK (2i) converts ESC cultures into a state with more uniform and high Nanog expression. However, it is so far unclear whether 2i acts through an inductive or selective mechanism. Here, we use continuous time-lapse imaging to quantify the dynamics of death, proliferation, and Nanog expression in mouse ESCs after 2i addition. We show that 2i has a dual effect: it both leads to increased cell death of Nanog low ESCs (selective effect) and induces and maintains high Nanog levels (inductive effect) in single ESCs. Genetic manipulation further showed that presence of NANOG protein is important for cell viability in 2i medium. This demonstrates complex Nanog-dependent effects of 2i treatment on ESC cultures.
Insights
Dual inhibition (2i) of GSK3 and MEK in embryonic stem cells (ESCs) promotes uniform Nanog expression by selectively eliminating low-Nanog cells and inducing high Nanog levels. NANOG protein is crucial for ESC survival in 2i conditions.
Area of Science:
- Stem cell biology
- Developmental biology
- Cell signaling
Background:
- Embryonic stem cells (ESCs) exhibit variable pluripotency factor expression (e.g., Nanog) in serum/LIF culture.
- Dual inhibition (2i) of GSK3 and MEK signaling promotes uniform, high Nanog expression in ESCs.
- The mechanism of 2i action (inductive vs. selective) on Nanog heterogeneity remains unclear.
Purpose of the Study:
- To investigate the precise mechanism by which 2i treatment influences Nanog expression dynamics in mouse ESCs.
- To differentiate between inductive and selective effects of 2i on Nanog heterogeneity.
- To elucidate the role of NANOG protein in ESC viability under 2i conditions.
Main Methods:
- Continuous time-lapse imaging to monitor cell death, proliferation, and Nanog expression dynamics.
- Quantitative analysis of single ESC behavior following 2i addition.
- Genetic manipulation to assess the necessity of NANOG protein for cell survival.
Main Results:
- 2i treatment exhibits a dual effect: it selectively eliminates Nanog-low ESCs and induces/maintains high Nanog expression.
- Single-cell analysis reveals both inductive and selective contributions of 2i to Nanog homogeneity.
- Genetic studies confirm that NANOG protein presence is essential for ESC viability in 2i medium.
Conclusions:
- 2i exerts complex, Nanog-dependent effects on ESC cultures, acting through both induction and selection.
- The findings clarify the mechanism underlying 2i-mediated pluripotency factor homogeneity.
- This study highlights the critical role of NANOG in maintaining ESCs under specific culture conditions.
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