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Updated: Feb 8, 2026

Polymalic Acid-based Nano Biopolymers for Targeting of Multiple Tumor Markers: An Opportunity for Personalized Medicine?
Published on: June 13, 2014
Molecular pathway activation - New type of biomarkers for tumor morphology and personalized selection of target drugs
Anton Buzdin1, Maxim Sorokin2, Andrew Garazha3
1I.M. Sechenov First Moscow State Medical University, Moscow, Russia; Omicsway Corp., Walnut, CA, USA; Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Moscow, Russia.
Abstract:
Anticancer target drugs (ATDs) specifically bind and inhibit molecular targets that play important roles in cancer development and progression, being deeply implicated in intracellular signaling pathways. To date, hundreds of different ATDs were approved for clinical use in the different countries. Compared to previous chemotherapy treatments, ATDs often demonstrate reduced side effects and increased efficiency, but also have higher costs. However, the efficiency of ATDs for the advanced stage tumors is still insufficient. Different ATDs have different mechanisms of action and are effective in different cohorts of patients. Personalized approaches are therefore needed to select the best ATD candidates for the individual patients. In this review, we focus on a new generation of biomarkers - molecular pathway activation - and on their applications for predicting individual tumor response to ATDs. The success in high throughput gene expression profiling and emergence of novel bioinformatic tools reinforced quick development of pathway related field of molecular biomedicine. The ability to quantitatively measure degree of a pathway activation using gene expression data has revolutionized this field and made the corresponding analysis quick, robust and inexpensive. This success was further enhanced by using machine learning algorithms for selection of the best biomarkers. We review here the current progress in translating these studies to clinical oncology and patient-oriented adjustment of cancer therapy.
Insights
Anticancer target drugs (ATDs) show promise but require personalized selection. Molecular pathway activation biomarkers, analyzed via gene expression and machine learning, can predict individual tumor response to ATDs for better cancer therapy.
Area of Science:
- Molecular Oncology
- Biomarker Discovery
- Bioinformatics
Background:
- Anticancer target drugs (ATDs) offer improved efficacy and reduced side effects over traditional chemotherapy.
- However, ATD effectiveness is limited in advanced cancers, necessitating personalized treatment strategies.
- Patient response to ATDs varies due to differing molecular targets and intracellular signaling pathways involved in cancer progression.
Purpose of the Study:
- To review the application of molecular pathway activation as a novel biomarker for predicting individual tumor response to ATDs.
- To highlight advancements in gene expression profiling and bioinformatics for quantitative pathway activation analysis.
- To discuss the translation of these findings into clinical oncology for patient-centered cancer therapy adjustments.
Main Methods:
- Utilizing high-throughput gene expression profiling to quantitatively measure pathway activation.
- Employing advanced bioinformatic tools for robust and cost-effective pathway analysis.
- Leveraging machine learning algorithms for the selection of optimal predictive biomarkers.
Main Results:
- Quantitative measurement of pathway activation using gene expression data provides a robust method for biomarker development.
- Bioinformatic tools and machine learning enhance the efficiency and accuracy of identifying predictive biomarkers.
- These advancements facilitate a deeper understanding of individual tumor biology and drug response.
Conclusions:
- Molecular pathway activation represents a new generation of biomarkers for personalized cancer therapy.
- Gene expression profiling combined with bioinformatics and machine learning enables precise prediction of ATD efficacy.
- Translating these molecular insights into clinical practice is crucial for optimizing patient-oriented cancer treatment.
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