Backbone-free duplex-stacked monomer nucleic acids exhibiting Watson-Crick selectivity
Gregory P Smith1, Tommaso P Fraccia2,3, Marco Todisco2
1Department of Physics and Soft Materials Research Center, University of Colorado Boulder, Boulder, CO 80309-0390.
Summary
Nucleic acid (NA) monomers self-assemble into liquid crystals, forming structures that mimic biological DNA and RNA. This self-assembly shows base-pair stacking and Watson-Crick selectivity, favoring A-T and C-G combinations.
Area of Science:
- Biochemistry
- Materials Science
- Physical Chemistry
Background:
- Nucleic acids (NA) are fundamental to life, typically existing as polymers.
- Understanding NA self-assembly is crucial for origins of life research and nanotechnology.
Purpose of the Study:
- To investigate the self-assembly behavior of nucleic acid mononucleotide triphosphates (NTPs).
- To determine if polymer-free NTPs can form ordered structures mimicking biological NA.
Main Methods:
- Studying aqueous solutions of dNTPs and rNTPs at high concentrations and low temperatures.
- Observing phase transitions and liquid crystal ordering using physical chemistry techniques.
Main Results:
- Nucleic acid mononucleotide triphosphates self-assemble into chromonic columnar liquid crystal phases.
- This polymer-free assembly exhibits duplex stacking of base pairs and Watson-Crick selectivity.
- Duplex columnar ordering is most stable for adenosine-thymine (A-T) and cytosine-guanine (C-G) combinations.
Conclusions:
- Nucleic acid monomers can spontaneously form ordered, biologically relevant structures without polymerization.
- This finding offers insights into pre-biotic chemistry and potential applications in molecular self-assembly.
Related Concept Videos
Nucleic acids
190.2K
Nucleic acids are the most important macromolecules for the continuity of life. They carry the cell's genetic blueprint and carry instructions for its functioning.
DNA and RNA
The two main types of nucleic acids are deoxyribonucleic acid (DNA) and ribonucleic acid (RNA). DNA is the genetic material in all living organisms, ranging from single-celled bacteria to multicellular mammals. It is in the nucleus of eukaryotes and in the organelles, chloroplasts, and mitochondria. In prokaryotes,...
DNA and RNA
The two main types of nucleic acids are deoxyribonucleic acid (DNA) and ribonucleic acid (RNA). DNA is the genetic material in all living organisms, ranging from single-celled bacteria to multicellular mammals. It is in the nucleus of eukaryotes and in the organelles, chloroplasts, and mitochondria. In prokaryotes,...
190.2K
Nucleic Acids
50.6K
Nucleic acids are the most important macromolecules for the continuity of life. They carry the cell's genetic blueprint and carry instructions for its functioning.
DNA and RNA
The two main types of nucleic acids are deoxyribonucleic acid (DNA) and ribonucleic acid (RNA). DNA is the genetic material in all living organisms, ranging from single-celled bacteria to multicellular mammals. It is in the nucleus of eukaryotes and in the organelles, chloroplasts, and mitochondria. In prokaryotes,...
DNA and RNA
The two main types of nucleic acids are deoxyribonucleic acid (DNA) and ribonucleic acid (RNA). DNA is the genetic material in all living organisms, ranging from single-celled bacteria to multicellular mammals. It is in the nucleus of eukaryotes and in the organelles, chloroplasts, and mitochondria. In prokaryotes,...
50.6K
Nucleic Acids
9.0K
9.0K
Nucleic Acid Structure
9.2K
The pentose sugar in DNA is deoxyribose, while in RNA the pentose sugar is ribose. The difference between the sugars is the presence of the hydroxyl group on the ribose's second carbon and a hydrogen on the deoxyribose's second carbon. The phosphate residue attaches to the hydroxyl group of the 5′ carbon of one sugar and the hydroxyl group of the 3′ carbon of the sugar of the next nucleotide, which forms a 5′ to 3′ phosphodiester linkage.
DNA Structure
DNA...
DNA Structure
DNA...
9.2K
Nucleic Acids and Nucleotides
14.8K
Nucleic acids are the most important macromolecules for the continuity of life. They carry the cell's genetic blueprint and have instructions for its functioning. The two main types of nucleic acids are deoxyribonucleic acid (DNA) and ribonucleic acid (RNA).
Deoxyribonucleic Acid (DNA)
DNA is the genetic material in all living organisms, ranging from single-celled bacteria to multicellular mammals. It is in the nucleus of eukaryotes and the organelles such as chloroplasts and mitochondria....
Deoxyribonucleic Acid (DNA)
DNA is the genetic material in all living organisms, ranging from single-celled bacteria to multicellular mammals. It is in the nucleus of eukaryotes and the organelles such as chloroplasts and mitochondria....
14.8K
Biosynthesis of Nucleic Acids
1.2K
Nucleic acid biosynthesis is a fundamental biochemical process that produces the purine and pyrimidine nucleotides essential for DNA and RNA synthesis. This pathway maintains a balanced nucleotide pool, preventing imbalances that could jeopardize genetic integrity and cellular function. Given the crucial role of nucleotides, their synthesis is tightly regulated to ensure proper cellular homeostasis.Purine BiosynthesisThe biosynthesis of purine nucleotides begins with ribose-5-phosphate, a...
1.2K


