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DeePCG: Constructing coarse-grained models via deep neural networks
Linfeng Zhang1, Jiequn Han1, Han Wang2
1Program in Applied and Computational Mathematics, Princeton University, Princeton, New Jersey 08544, USA.
We developed a new method, Deep Coarse-Grained Potential (DeePCG), to create accurate many-body models for molecular simulations. This approach significantly speeds up sampling of coarse-grained variables, as demonstrated with liquid water.
Area of Science:
- Computational chemistry
- Materials science
- Statistical mechanics
Background:
- Coarse-grained models simplify complex molecular systems.
- Traditional methods often rely on approximations like two- and three-body potentials.
- Accurate many-body interactions are crucial for reliable simulations.
Purpose of the Study:
- Introduce a general framework for constructing many-body coarse-grained potentials.
- Develop a novel approach without ad hoc approximations.
- Enhance the efficiency of molecular simulations.
Main Methods:
- Developed the Deep Coarse-Grained Potential (DeePCG) scheme.
- Utilized a neural network trained on full atomistic data.
- Preserved system symmetries during neural network training.
- Applied DeePCG to liquid water using oxygen coordinates.
Main Results:
- Achieved highly accurate many-body coarse-grained potentials.
- Demonstrated significantly faster sampling of coarse-grained configurations.
- Obtained excellent agreement in correlation functions (two-body, three-body, and higher-order) between DeePCG and atomistic models for liquid water.
Conclusions:
- DeePCG offers a powerful and generalizable framework for coarse-grained modeling.
- The method effectively captures complex many-body interactions.
- DeePCG significantly improves simulation efficiency while maintaining high accuracy.
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