Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

DNA Packaging00:58

DNA Packaging

112.8K
Overview
112.8K
Chromatin Packaging01:32

Chromatin Packaging

19.3K
Each human somatic cell contains 6 billion base pairs of DNA. Each base pair is 0.34 nm long, meaning each diploid cell contains a staggering 2 meters of DNA. This long DNA strand is packed inside a nucleus measuring only 10-20 microns in diameter with the help of specialized DNA-binding proteins called histones. Together they form a compact DNA-protein complex called chromatin. The chromatin is further compacted into higher-order structures. The highest level of compaction is achieved during...
19.3K
Chromatin Packaging02:21

Chromatin Packaging

22.2K
Each human somatic cell contains 6 billion base-pairs of DNA. Each base-pair is 0.34 nm long, which means that each diploid cell contains a staggering 2 meters of DNA. How is such a long DNA strand packed inside a nucleus measuring only 10 - 20 microns in diameter? 
The chromatin
In combination with specialized DNA binding protein called Histones, the DNA double helix forms a compact DNA: protein complex called chromatin. The chromatin itself is further compacted into higher-order...
22.2K
Chromatin Packaging02:21

Chromatin Packaging

9.8K
9.8K
IP3/DAG Signaling Pathway01:11

IP3/DAG Signaling Pathway

14.5K
Membrane lipids such as phosphatidylinositol (PI) are precursors for several membrane-bound and soluble second messengers. Specific kinases phosphorylate PI and produce phosphorylated inositol phospholipids. One such inositol phospholipids are the  phosphatidylinositol-4,5 bisphosphate [PI(4,5)P2], present in the inner half of the lipid bilayer. Upon ligand binding, GPCR stimulates Gq proteins to turn on phospholipase Cꞵ. Activated phospholipase Cꞵ cleaves PI(4,5)P2 and...
14.5K
Statistical Package for the Social Sciences (SPSS)01:22

Statistical Package for the Social Sciences (SPSS)

1.3K
The Statistical Package for the Social Sciences, or SPSS, is a data management and analysis software suite. Developed by SPSS Inc. in 1968 and acquired by IBM in 2009, this tool was initially designed for social science data analysis, evolving to serve a wider range of disciplines. It was later renamed to Statistical Product and Service Solutions.
SPSS streamlines the process from data preparation to analysis and reporting. It is characterized by its user-friendly interface, which conceals...
1.3K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Same Data, Different Audiences: Using Personas to Scope a Supercomputing Job Queue Visualization.

IEEE transactions on visualization and computer graphics·2026
Same author

Reimagining Disassembly Interfaces With Visualization: Combining Instruction Tracing and Control Flow With DisViz.

IEEE transactions on visualization and computer graphics·2025
Same author

A Deixis-Centered Approach for Documenting Remote Synchronous Communication Around Data Visualizations.

IEEE transactions on visualization and computer graphics·2024
Same author

Design Concerns for Integrated Scripting and Interactive Visualization in Notebook Environments.

IEEE transactions on visualization and computer graphics·2024
Same author

Visual Exploratory Analysis for Designing Large-Scale Network-on-Chip Architectures: A Domain Expert-Led Design Study.

IEEE transactions on visualization and computer graphics·2023
Same author

Traveler: Navigating Task Parallel Traces for Performance Analysis.

IEEE transactions on visualization and computer graphics·2022
Same journal

MesoSplats: Texture Synthesis with Gaussian Splatting.

IEEE transactions on visualization and computer graphics·2026
Same journal

GLLA: A Unified Force-Directed Graph Layout Framework Supporting Local Adjustments.

IEEE transactions on visualization and computer graphics·2026
Same journal

Multi-Perception Crowd: Learning to combine entity and implicit perception for diverse crowd simulation.

IEEE transactions on visualization and computer graphics·2026
Same journal

Hiding in Plain Sight: Camouflaging Real-world Objects.

IEEE transactions on visualization and computer graphics·2026
Same journal

RTF2Mesh: Restricted Tangent Face Based Mesh Compression With Neural Displacement Fields.

IEEE transactions on visualization and computer graphics·2026
Same journal

Practical Occluder Generation for Mobile Games.

IEEE transactions on visualization and computer graphics·2026
See all related articles

Related Experiment Video

Updated: Feb 7, 2026

Author Spotlight: Workflow for Integrating POCUS Data into EHR for Managing Heart Failure Patients
03:47

Author Spotlight: Workflow for Integrating POCUS Data into EHR for Managing Heart Failure Patients

Published on: July 12, 2024

1.2K

Preserving Command Line Workflow for a Package Management System Using ASCII DAG Visualization.

Katherine E Isaacs, Todd Gamblin

    IEEE Transactions on Visualization and Computer Graphics
    |July 27, 2018
    PubMed
    Summary
    This summary is machine-generated.

    This study introduces an interactive ASCII visualization for software package dependency graphs, preserving command-line workflows. The new visualization was preferred by users in command-line environments over existing methods.

    More Related Videos

    Author Spotlight: A Machine-Vision Approach to Transmission Electron Microscopy Workflows, Results Analysis and Data Management
    10:23

    Author Spotlight: A Machine-Vision Approach to Transmission Electron Microscopy Workflows, Results Analysis and Data Management

    Published on: June 23, 2023

    3.5K
    Analyzing Melts and Fluids from Ab Initio Molecular Dynamics Simulations with the UMD Package
    06:37

    Analyzing Melts and Fluids from Ab Initio Molecular Dynamics Simulations with the UMD Package

    Published on: September 17, 2021

    5.1K

    Related Experiment Videos

    Last Updated: Feb 7, 2026

    Author Spotlight: Workflow for Integrating POCUS Data into EHR for Managing Heart Failure Patients
    03:47

    Author Spotlight: Workflow for Integrating POCUS Data into EHR for Managing Heart Failure Patients

    Published on: July 12, 2024

    1.2K
    Author Spotlight: A Machine-Vision Approach to Transmission Electron Microscopy Workflows, Results Analysis and Data Management
    10:23

    Author Spotlight: A Machine-Vision Approach to Transmission Electron Microscopy Workflows, Results Analysis and Data Management

    Published on: June 23, 2023

    3.5K
    Analyzing Melts and Fluids from Ab Initio Molecular Dynamics Simulations with the UMD Package
    06:37

    Analyzing Melts and Fluids from Ab Initio Molecular Dynamics Simulations with the UMD Package

    Published on: September 17, 2021

    5.1K

    Area of Science:

    • Computer Science
    • Software Engineering
    • Data Visualization

    Background:

    • Package managers simplify software installation and maintenance.
    • Dependency graphs are crucial for understanding software requirements but are difficult to visualize in command-line environments.
    • Existing methods for visualizing package dependencies disrupt command-line workflows.

    Purpose of the Study:

    • To develop an interactive ASCII visualization for software package dependency graphs.
    • To preserve the command-line workflow for users of the Spack package manager.
    • To address the challenges of visualizing complex software dependencies in remote environments.

    Main Methods:

    • Conducted interviews with Spack maintainers to identify user goals and visual tasks.
    • Developed an interactive ASCII visualization for Spack's dependency graphs.
    • Evaluated the visualization through a command-line-centered study comparing it to existing approaches.

    Main Results:

    • The developed ASCII visualization effectively represents package dependency graphs.
    • Users preferred the interactive ASCII visualization when working within a command-line interface.
    • The visualization maintains the user's workflow without requiring external graphical tools.

    Conclusions:

    • Interactive ASCII visualizations can be a viable solution for displaying complex data like software dependencies in command-line environments.
    • The developed visualization enhances the usability of package management systems like Spack for command-line users.
    • Preserving command-line workflows is critical for users in high-performance computing and remote environments.