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Published on: June 30, 2016
Inhibition of Enterococcus faecalis Growth and Biofilm Formation by Molecule Targeting Cyclic di-AMP Synthetase
Lulu Chen1, Xin Li2, Xuedong Zhou3
1State Key Laboratory of Oral Diseases, National Clinical Research Center for Oral Diseases, West China Hospital of Stomatology, Sichuan University, Chengdu, PR China; Department of Pediatric Dentistry, West China Hospital of Stomatology, Sichuan University, Chengdu, PR China.
Introduction:
Enterococcus faecalis is correlated with oral diseases including recurrent root canal treatment failure because of its biofilm formation ability and various virulence factors. Cyclic di-AMP (c-di-AMP) is an omnipresent second messenger involved in many crucial cellular physiological processes, including biofilm formation. ST056083 is a small molecule working as an inhibitor of the c-di-AMP synthetase DNA integrity scanning protein (DisA) in vitro. In this study, the impact of ST056083 on E. faecalis DisA activity, bacterial growth, and biofilm formation was tested.
Methods:
The binding affinity between the protein and ligand was evaluated using the Amber score, and the binding mode was analyzed and visualized using UCSF Chimera (Resource for Biocomputing, Visualization, and Informatics, University of California, San Francisco, San Francisco, CA). The effect of ST056083 on E. faecalis DisA was evaluated using the coralyne assay. The effect of ST056083 on E. faecalis biofilm formation was determined by the biofilm quantification assay, scanning electron microscopic examination, and 3-dimensional confocal laser scanning microscopic assay. The effect of ST056083 on E. faecalis exopolysaccharide synthesis was measured by the anthrone-sulfuric method.
Results:
We expressed and purified E. faecalis DisA in vitro and confirmed the inhibitory effect of ST056083 on its biological activity. In addition, we showed the inhibitory effect of ST056083 on E. faecalis growth, biofilm formation, and exopolysaccharide synthesis.
Conclusions:
Our findings enhance the understanding of the physiological role of c-di-AMP in E. faecalis and represent a preliminary study on the ST056083 inhibitory effect and mechanism.
Insights
The small molecule ST056083 inhibits Enterococcus faecalis DNA integrity scanning protein (DisA) activity. This inhibition reduces bacterial growth, biofilm formation, and exopolysaccharide synthesis, offering potential therapeutic strategies.
Area of Science:
- Microbiology
- Molecular Biology
- Drug Discovery
Background:
- Enterococcus faecalis is a key pathogen in oral diseases and endodontic treatment failures due to its robust biofilm formation.
- Cyclic di-AMP (c-di-AMP) is a vital second messenger regulating essential cellular processes, including biofilm development in bacteria.
- ST056083 is identified as a small molecule inhibitor targeting the c-di-AMP synthetase, DNA integrity scanning protein (DisA), in vitro.
Purpose of the Study:
- To investigate the inhibitory effects of ST056083 on E. faecalis DisA activity.
- To assess the impact of ST056083 on E. faecalis bacterial growth and biofilm formation.
- To elucidate the mechanism by which ST056083 affects bacterial physiology.
Main Methods:
- In vitro expression and purification of E. faecalis DisA.
- Evaluation of ST056083's inhibitory effect on DisA activity using biochemical assays.
- Assessment of bacterial growth, biofilm quantification, exopolysaccharide synthesis, and microscopic analysis (SEM, 3D confocal microscopy).
Main Results:
- ST056083 effectively inhibits the biological activity of purified E. faecalis DisA.
- The compound significantly reduces E. faecalis growth and biofilm formation.
- ST056083 treatment leads to decreased exopolysaccharide synthesis in E. faecalis.
Conclusions:
- The study confirms ST056083 as an inhibitor of E. faecalis DisA, impacting bacterial growth and virulence.
- Findings contribute to understanding the role of c-di-AMP signaling in E. faecalis physiology.
- This research provides a foundation for developing ST056083 as a potential therapeutic agent against E. faecalis infections.
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