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Updated: Feb 7, 2026

Advancements in the Metabolic Profiling of Three-Dimensional Brain Tumor Spheroids for Drug Screening
Published on: September 5, 2025
Metabolic profiling of the anti-tumor drug regorafenib in mice
Yi-Kun Wang1, Xue-Rong Xiao2, Kang-Ping Xu3
1States Key Laboratory of Phytochemistry and Plant Resources in West China, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, China; University of Chinese Academy of Sciences, Beijing, 100049, China.
Abstract:
Regorafenib is a novel tyrosine kinase inhibitor, which has been approved by the United States Food and Drug Administration for the treatment of various tumors. The purpose of the present study was to describe the metabolic map of regorafenib, and investigate its effect on liver function. Mass spectrometry-based metabolomics approach integrated with multiple mass defect filter was used to determine the metabolites of regorafenib in vitro incubation mixtures (human liver microsomes and mouse liver microsomes), serum, urine and feces samples from mice treated with 80 mg/kg regorafenib. Eleven metabolites including four novel metabolites were identified in the present investigation. As halogen substituted drug, reductive defluorination and oxidative dechlorination metabolites of regorafenib were firstly report in present study. By screening using recombinant cytochrome P450 s (CYPs), CYP3A4 was found to be the principal isoforms involved in regorafenib metabolism. The predication with a molecular docking model confirmed that regorafenib had potential to interact with the active sites of CYP3A4, CYP3A5 and CYP2D6. Serum chemistry analysis revealed no evidence of hepatic damage from regorafenib exposure. This study provided a global view of regorafenib metabolism and its potential side-effects.
Insights
This study maps regorafenib metabolism, identifying eleven metabolites including four novel ones. Regorafenib metabolism primarily involves CYP3A4 and does not show evidence of liver damage in mice.
Area of Science:
- Pharmacology and Toxicology
- Drug Metabolism
- Biochemistry
Background:
- Regorafenib is an approved tyrosine kinase inhibitor for various cancers.
- Understanding its metabolic pathways and potential liver effects is crucial for safe clinical use.
Purpose of the Study:
- To elucidate the comprehensive metabolic map of regorafenib.
- To investigate the impact of regorafenib on liver function.
- To identify the primary cytochrome P450 enzymes involved in its metabolism.
Main Methods:
- Mass spectrometry-based metabolomics and multiple mass defect filtering were employed.
- Metabolites were analyzed in vitro (human and mouse liver microsomes) and in vivo (mouse serum, urine, feces).
- Recombinant cytochrome P450 (CYP) screening and molecular docking were used to identify metabolic enzymes.
Main Results:
- Eleven regorafenib metabolites were identified, including four novel compounds.
- Reductive defluorination and oxidative dechlorination metabolites were reported for the first time.
- CYP3A4 was identified as the principal enzyme in regorafenib metabolism, with potential interactions with CYP3A5 and CYP2D6.
Conclusions:
- This study provides a detailed metabolic profile of regorafenib.
- Regorafenib metabolism involves novel pathways, including dehalogenation.
- No evidence of hepatic damage was observed, suggesting a favorable liver safety profile.
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