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Published on: March 17, 2020
A dormant TIL phenotype defines non-small cell lung carcinomas sensitive to immune checkpoint blockers
S N Gettinger1, J Choi2, N Mani3,4
1Medical Oncology and Yale Cancer Center, New Haven, CT, 06511, USA.
Abstract:
The biological determinants of sensitivity and resistance to immune checkpoint blockers are not completely understood. To elucidate the role of intratumoral T-cells and their association with the tumor genomic landscape, we perform paired whole exome DNA sequencing and multiplexed quantitative immunofluorescence (QIF) in pre-treatment samples from non-small cell lung carcinoma (NSCLC) patients treated with PD-1 axis blockers. QIF is used to simultaneously measure the level of CD3+ tumor infiltrating lymphocytes (TILs), in situ T-cell proliferation (Ki-67 in CD3) and effector capacity (Granzyme-B in CD3). Elevated mutational load, candidate class-I neoantigens or intratumoral CD3 signal are significantly associated with favorable response to therapy. Additionally, a "dormant" TIL signature is associated with survival benefit in patients treated with immune checkpoint blockers characterized by elevated TILs with low activation and proliferation. We further demonstrate that dormant TILs can be reinvigorated upon PD-1 blockade in a patient-derived xenograft model.
Insights
Understanding T-cells in non-small cell lung cancer (NSCLC) is key for immune checkpoint blocker therapy. This study links tumor mutations and T-cell activity to treatment response, identifying a "dormant" T-cell signature that can be reactivated.
Area of Science:
- Oncology
- Immunology
- Genomics
Background:
- The mechanisms of response and resistance to immune checkpoint blockers (ICBs) in cancer are not fully understood.
- Intratumoral T-cells and the tumor genomic landscape are critical factors influencing ICB efficacy.
Purpose of the Study:
- To investigate the relationship between intratumoral T-cells, tumor genomics, and response to PD-1 axis blockers in non-small cell lung carcinoma (NSCLC).
- To identify biomarkers predictive of response and survival in NSCLC patients treated with ICBs.
Main Methods:
- Paired whole exome DNA sequencing and multiplexed quantitative immunofluorescence (QIF) were performed on pre-treatment NSCLC samples.
- QIF measured CD3+ tumor infiltrating lymphocytes (TILs), T-cell proliferation (Ki-67), and effector function (Granzyme-B).
- Genomic data and QIF markers were correlated with clinical response and survival outcomes.
Main Results:
- Higher tumor mutational burden, neoantigen load, and intratumoral CD3+ T-cell levels were associated with favorable responses to PD-1 blockade.
- A distinct "dormant" TIL signature (elevated TILs with low proliferation/activation) correlated with survival benefits.
- Dormant TILs demonstrated potential for reactivation upon PD-1 blockade in a preclinical model.
Conclusions:
- Tumor genomics and specific intratumoral T-cell characteristics are significant determinants of response to immune checkpoint inhibitors in NSCLC.
- The "dormant" TIL signature represents a potentially targetable state for enhancing ICB therapy efficacy.
- Further research into T-cell dormancy and reactivation could lead to improved treatment strategies for NSCLC.
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