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Updated: Feb 6, 2026

Identification of Rare Bacterial Pathogens by 16S rRNA Gene Sequencing and MALDI-TOF MS
Published on: July 11, 2016
[Gray mold disease of Paris polyphylla var. yunnanensis and its pathogen identification]
Wei-Si Ma1, Jun Chen2, Shi-Wu Yan1
1Institute of Medicinal Plants, Yunnan Academy of Agricultural Sciences, Kunming 650205, China.
Abstract:
Gray mold disease is one of the most important diseases of planted Paris polyphylla var. yunnanensis, the disease appeared primarily as blossom blights and fruit rots, but also as stem rots, leaf rots.In this study, the pathogenetic fungi was isolated from plant tissue or sclerotia that covering the fruit of diseased P. polyphylla var. yunnanensis, the pathogen was certified according to Koch's Postulation. The pathogen produced abundant black, irregular sclerotia on surface of diseased plants and potato dextrose agar. The conidiophores and clusters of oval conidia resembled a grape-like cluster, the size of conidia was 9.70-13.70 μm [average of (11.32±0.82)μm]×7.05-9.12 μm [average of (8.24±0.48)μm], the microconidia produced on potato dextrose agar were spherical,and the size was (3.34±0.31) μm,the pathogen was identified as Botrytis sp based on morphological characteristics. The DNA sequence analysis of the G3PDH, HSP60, RPB2 genes placed the pathogen in a single clade that outside defined species of Botrytis, so the pathogen could be identified as a new species of Botrytis. The pathogen requires 20 °C, pH 8, darkness or low light condition for the best growth.
Insights
Gray mold disease threatens Paris polyphylla var. yunnanensis. Researchers identified a new Botrytis species causing significant plant damage, necessitating further study for control strategies.
Area of Science:
- Plant Pathology
- Mycology
- Botany
Background:
- Gray mold disease is a major threat to Paris polyphylla var. yunnanensis, causing blossom blight, fruit rot, stem rot, and leaf rot.
- This disease significantly impacts the cultivation and yield of this important medicinal plant.
Purpose of the Study:
- To isolate and identify the causal agent of gray mold disease in Paris polyphylla var. yunnanensis.
- To characterize the pathogen morphologically and genetically.
- To determine the optimal growth conditions for the identified pathogen.
Main Methods:
- Isolation of the pathogenic fungus from infected plant tissues and sclerotia.
- Koch's Postulates were used for pathogen verification.
- Morphological characterization including conidia size and sclerotia formation.
- DNA sequence analysis of G3PDH, HSP60, and RPB2 genes.
- Determination of optimal growth conditions (temperature, pH, light).
Main Results:
- A fungal pathogen was successfully isolated and confirmed as the cause of gray mold disease.
- Morphological analysis revealed abundant black sclerotia and characteristic conidia, identifying the pathogen as Botrytis sp.
- DNA sequence analysis indicated that the pathogen represents a new species within the Botrytis genus.
- Optimal growth occurred at 20 °C, pH 8, under dark or low light conditions.
Conclusions:
- The study identified a novel Botrytis species responsible for gray mold disease in Paris polyphylla var. yunnanensis.
- Understanding the pathogen's characteristics and optimal growth conditions is crucial for developing effective disease management strategies.
- This finding contributes to the knowledge of plant pathogenic fungi and the management of diseases in medicinal plants.
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