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Updated: Feb 6, 2026

Preparation of Rat Skeletal Muscle Homogenates for Nitrate and Nitrite Measurements
Published on: July 29, 2021
Measurement of nitrate and nitrite in biopsy-sized muscle samples using HPLC
Ashley D Troutman1,2, Edgar J Gallardo1, Mary Beth Brown2
1Department of Kinesiology, Indiana University-Purdue University Indianapolis , Indianapolis, Indiana.
Abstract:
Studies of rats have indicated that skeletal muscle plays a central role in whole-body nitrate ( )/nitrite ( )/nitric oxide (NO) metabolism. Extending these results to humans, however, is challenging due to the small size of needle biopsy samples. We therefore developed a method to precisely and accurately quantify and in biopsy-sized muscle samples. and were extracted from rat soleus samples using methanol combined with mechanical homogenization + ultrasound, bead beating, pulverization at liquid N2 temperature or pulverization + 0.5% Triton X-100. After centrifugation to remove proteins, and were measured using HPLC. Mechanical homogenization + ultrasound resulted in the lowest content (62 ± 20 pmol/mg), with high variability [coefficient of variation (CV) >50%] across samples from the same muscle. The / ratio (0.019 ± 0.006) was also elevated, suggestive of reduction during tissue processing. Bead beating or pulverization yielded lower and slightly higher levels, but reproducibility was still poor. Pulverization + 0.5% Triton X-100 provided the highest content (124 ± 12 pmol/mg) and lowest / ratio (0.008 ± 0.001), with the least variability between duplicate samples (CV ~15%). These values are consistent with literature data from larger rat muscle samples analyzed using chemiluminescence. Samples were stable for at least 5 wk at -80°C, provided residual xanthine oxidoreductase activity was blocked using 0.1 mmol/l oxypurinol. We have developed a method capable of measuring and in <1 mg of muscle. This method should prove highly useful in investigating the role of skeletal muscle in / /NO metabolism in human health and disease. NEW & NOTEWORTHY Measurement of nitrate and especially nitrite in small, i.e., biopsy-sized, muscle samples is analytically challenging. We have developed a precise, accurate, and convenient method for doing so using an affordable commercial HPLC system.
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