Related Experiment Video
Updated: Feb 5, 2026

Author Spotlight: Innovative Approaches to Understanding Plant Structure-Function Relationships for Climate-Resilient Crops
Published on: July 12, 2024
Chromatin structure profile data from DNS-seq: Differential nuclease sensitivity mapping of four reference tissues of
Zachary M Turpin1, Daniel L Vera2, Savannah D Savadel1
1Department of Biological Science, Florida State University, Tallahassee, FL 32306-4295, USA.
Abstract:
Presented here are data from Next-Generation Sequencing of differential micrococcal nuclease digestions of formaldehyde-crosslinked chromatin in selected tissues of maize (Zea mays) inbred line B73. Supplemental materials include a wet-bench protocol for making DNS-seq libraries, the DNS-seq data processing pipeline for producing genome browser tracks. This report also includes the peak-calling pipeline using the iSeg algorithm to segment positive and negative peaks from the DNS-seq difference profiles. The data repository for the sequence data is the NCBI SRA, BioProject Accession PRJNA445708.
Related Concept Videos
Inheritance of Chromatin Structures
Chromatin Structure Regulates pre-mRNA Processing
The chromatin structure, especially...
Duplication of Chromatin Structure
The basic unit of the chromatin is the nucleosome, consisting of DNA wrapped around octameric histone proteins and short stretches of linker DNA separating individual nucleosomes. The histone proteins within the nucleosome have their...
Chromatin Structure and RNA Splicing
Chromatin Packaging
The chromatin
In combination with specialized DNA binding protein called Histones, the DNA double helix forms a compact DNA: protein complex called chromatin. The chromatin itself is further compacted into higher-order...
Spreading of Chromatin Modifications
Writers
The writer...

