Related Experiment Video
Updated: Feb 5, 2026

09:30
Author Spotlight: Exploring Cellular Processes by Modeling Ligands in Cryo-EM Maps
Published on: July 19, 2024
2.1K
Ligand Isomerism in Coordination Cages
Hareesha Dasary1, Rajamony Jagan1, Dillip Kumar Chand1
1Department of Chemistry , Indian Institute of Technology Madras , Chennai 600036 , India.
Inorganic Chemistry
|September 20, 2018
Summary
Researchers created palladium(II) coordination cages using pyridyl-urea ligands. These cages exhibit ligand-isomerism and demonstrate varying abilities for nitrate ion binding and carbon dioxide adsorption.
Area of Science:
- Coordination Chemistry
- Supramolecular Chemistry
- Materials Science
Background:
- Palladium(II) complexes are crucial in catalysis and materials science.
- Designing discrete supramolecular structures with tunable properties is an active research area.
- Ligand isomerism can influence the self-assembly and properties of coordination cages.
Purpose of the Study:
- To synthesize and characterize novel palladium(II) coordination cages using regioisomeric phenylene-diurea ligands.
- To investigate the phenomenon of ligand-isomerism in the resulting coordination cages.
- To explore the anion binding and carbon dioxide adsorption capabilities of these novel supramolecular structures.
Main Methods:
- Synthesis of three regioisomeric 3-pyridyl appended phenylene-diurea ligands (L1, L2, L3).
- Complexation reactions of ligands with palladium(II) nitrate to form discrete Pd2L4 cages.
- Structural characterization of the cages, including analysis of hydrogen bonding and guest encapsulation.
- Evaluation of carbon dioxide (CO2) adsorption properties.
Main Results:
- Formation of single discrete isomeric coordination cages (1, 2, and 3) with Pd2L4 stoichiometry.
- Demonstration of ligand-isomerism, with distinct endohedral/exohedral arrangements of urea hydrogen atoms in cages 1, 2, and 3.
- Cages 1 and 2 encapsulated nitrate ions via hydrogen bonding interactions, while cage 3 remained anion-free.
- All synthesized cages exhibited varying abilities for CO2 gas adsorption.
Conclusions:
- The study successfully illustrates ligand-isomerism in palladium(II) coordination cages.
- The regiochemistry of the phenylene spacer significantly impacts cage structure, anion binding, and CO2 adsorption.
- These coordination cages represent a promising platform for gas adsorption applications.
Related Concept Videos
Structural Isomerism
21.7K
Isomerism in Complexes
Isomers are different chemical species that have the same chemical formula. Structural isomerism of coordination compounds can be divided into two subcategories, the linkage isomers and coordination-sphere isomers.
Linkage isomers occur when the coordination compound contains a ligand that can bind to the transition metal center through two different atoms. For example, the CN− ligand can bind through the carbon atom or through the nitrogen atom. Similarly, SCN− can...
Isomers are different chemical species that have the same chemical formula. Structural isomerism of coordination compounds can be divided into two subcategories, the linkage isomers and coordination-sphere isomers.
Linkage isomers occur when the coordination compound contains a ligand that can bind to the transition metal center through two different atoms. For example, the CN− ligand can bind through the carbon atom or through the nitrogen atom. Similarly, SCN− can...
21.7K
Coordination Number and Geometry
19.0K
For transition metal complexes, the coordination number determines the geometry around the central metal ion. Table 1 compares coordination numbers to molecular geometry. The most common structures of the complexes in coordination compounds are octahedral, tetrahedral, and square planar.
19.0K
Coordination Compounds and Nomenclature
26.8K
In most main group element compounds, the valence electrons of the isolated atoms combine to form chemical bonds that satisfy the octet rule. For instance, the four valence electrons of carbon overlap with electrons from four hydrogen atoms to form CH4. The one valence electron leaves sodium and adds to the seven valence electrons of chlorine to form the ionic formula unit NaCl (Figure 1a). Transition metals do not normally bond in this fashion. They primarily form coordinate covalent bonds, a...
26.8K
Isomerism
23.3K
Isomers are molecules with the same molecular formula but different structural arrangements. Isomers can be further classified into constitutional isomers and stereoisomers. Constitutional isomers differ in the connectivity of their constituent atoms. For example, 2-butanol and diethyl ether are constitutional isomers, as they have the same chemical formula, C4H10O, but differ in the connectivity of the carbon and oxygen atoms. Constitutional isomers have different physical and chemical...
23.3K
Metal-Ligand Bonds
24.3K
The hemoglobin in the blood, the chlorophyll in green plants, vitamin B-12, and the catalyst used in the manufacture of polyethylene all contain coordination compounds. Ions of the metals, especially the transition metals, are likely to form complexes.
In these complexes, transition metals form coordinate covalent bonds, a kind of Lewis acid-base interaction in which both of the electrons in the bond are contributed by a donor (Lewis base) to an electron acceptor (Lewis acid). The Lewis acid in...
In these complexes, transition metals form coordinate covalent bonds, a kind of Lewis acid-base interaction in which both of the electrons in the bond are contributed by a donor (Lewis base) to an electron acceptor (Lewis acid). The Lewis acid in...
24.3K
Isomerism in Alkenes
15.1K
Alkenes like 1-butene and 2-butene exhibit constitutional isomerism, as they differ in the position of the double bond. Further, 2-butene exhibits stereoisomerism and exists as two distinct compounds differing in spatial arrangement.
An isomer is called cis-2-butene when the methyl groups are on the same side of the double bond, and the other stereoisomer, in which methyl groups are on the opposite side of the double bond, is called trans-2-butene. The cis and trans stereoisomers are not...
An isomer is called cis-2-butene when the methyl groups are on the same side of the double bond, and the other stereoisomer, in which methyl groups are on the opposite side of the double bond, is called trans-2-butene. The cis and trans stereoisomers are not...
15.1K

