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Predicting polymorphism in molecular crystals using orientational entropy.

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|September 22, 2018
PubMed
Summary
This summary is machine-generated.

This study presents a computational method to discover molecular crystal polymorphs at finite temperatures. The technique uses enhanced molecular dynamics simulations to identify and classify different crystal structures, revealing entropy-stabilized polymorphs.

Keywords:
crystal structure predictionenhanced samplingmolecular simulationpolymorphismurea

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Area of Science:

  • Computational chemistry
  • Materials science
  • Crystallography

Background:

  • Discovering molecular crystal polymorphs is crucial for materials science.
  • Simulating crystallization processes computationally is challenging due to long timescales.

Purpose of the Study:

  • To develop an efficient computational method for discovering polymorphs at finite temperatures.
  • To enable the identification and classification of different crystal structures within accessible simulation times.

Main Methods:

  • Utilized well-tempered metadynamics to enhance fluctuations of a collective variable.
  • Employed an entropy surrogate based on an extended pair correlation function.
  • Developed a similarity metric using generalized Kullback-Leibler divergence for configuration classification.
  • Applied hierarchical clustering to automatically group discovered configurations into polymorphs.

Main Results:

  • Successfully applied the method to urea and naphthalene, identifying multiple polymorphs for each.
  • Demonstrated the stabilization of at least one polymorph at finite temperature due to entropic effects.
  • Validated the computational approach for polymorph discovery and classification.

Conclusions:

  • The developed computational method effectively discovers and classifies molecular crystal polymorphs at finite temperatures.
  • Entropic effects play a significant role in stabilizing certain polymorphs.
  • This approach accelerates the exploration of the crystal structure landscape.