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Cross-Modal Multivariate Pattern Analysis
Published on: November 9, 2011
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Associations between polygenic risk scores for four psychiatric illnesses and brain structure using multivariate
Siri Ranlund1, Maria Joao Rosa2, Simone de Jong3
1Department of Neuroimaging, Institute of Psychiatry, Psychology and Neuroscience, King's College London, London, UK.
Neuroimage. Clinical
|October 20, 2018
Summary
This study used machine learning to link genetic risk scores for psychiatric disorders to brain structure. Polygenic liability for autism and schizophrenia showed associations with widespread grey matter changes, even in unaffected individuals.
Area of Science:
- Neuroimaging
- Psychiatric Genetics
- Machine Learning
Background:
- Psychiatric illnesses have complex genetic underpinnings and are associated with brain alterations.
- Previous studies used univariate methods to link polygenic risk scores (PRS) to brain structure.
- PRS likely influence distributed and covarying brain-wide effects, necessitating multivariate approaches.
Purpose of the Study:
- To investigate associations between brain structure and PRS for ADHD, autism, bipolar disorder, and schizophrenia using multivariate machine learning.
- To explore if genetic liability for psychiatric disorders is reflected in brain morphology.
- To determine if these associations are present independent of disease manifestation.
Main Methods:
- Utilized T1-weighted MRI scans from 213 individuals (including depression patients, bipolar disorder patients, and healthy controls).
- Calculated five psychiatric PRS based on Psychiatric Genomics Consortium data.
- Applied voxel-based morphometry and multivariate relevance vector regression to analyze grey matter patterns and PRS.
Main Results:
- A significant multivariate pattern of grey matter predicted the PRS for autism (r=0.20, p<0.03).
- Mean Squared Error (MSE) for the schizophrenia PRS was significant (MSE=1.30×10⁻⁵, p<0.02), suggesting an association.
- These brain-structure associations were observed in individuals without the specific psychiatric disorders.
Conclusions:
- Polygenic liability for autism and schizophrenia is associated with widespread grey matter concentration changes.
- These findings support the hypothesis that genetic risk for these disorders influences brain structure.
- The observed associations are likely driven by genetic predisposition rather than active disease processes.
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