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Updated: Feb 3, 2026

Live-Cell Imaging of Transcriptional Activity at DNA Double-Strand Breaks
Published on: September 20, 2021
Chromatin-remodeling factor, RSF1, controls p53-mediated transcription in apoptosis upon DNA strand breaks
Sunwoo Min1,2, Keeeun Kim1,3, Seong-Gwang Kim1,2,3
1Genomic Instability Research Center, Ajou University School of Medicine, Suwon, 16499, Korea.
Abstract:
Remodeling and spacing factor 1 (RSF1), which is one of chromatin-remodeling factors, has been linked to the DNA damage response (DDR) and DNA repair. However, the biological consequence of RSF1 deficiency in DDR in vivo and its molecular mechanisms remain unknown. Because defective DDR is related to neuropathological phenotypes, we developed neural-specific Rsf1 knockout mice. Rsf1 deficiency did not result in any neuropathological abnormalities, but prevented neural apoptosis triggered by excessive DNA strand breaks during neurogenesis. Likewise, cell death was significantly reduced in RSF1 deficient human cell lines after DNA damage, and the global transcriptome of these cells revealed that the expressions of p53 downstream genes were significantly reduced upon DNA strand breaks. Inactivation of these genes resulted from decreased binding of p53/p300 complex and subsequent reduction of H3 acetylation at their promoters. Our data show that RSF1 is necessary for p53-dependent gene expression in response to DNA strand breaks via controlling the accessibility of p53/p300 complex to its target genes and contributes to the maintenance of cellular integrity.
Insights
Remodeling and spacing factor 1 (RSF1) deficiency prevents cell death following DNA damage by regulating p53-dependent gene expression. This chromatin remodeler maintains cellular integrity by controlling DNA repair pathways.
Area of Science:
- Molecular Biology
- Genetics
- Cell Biology
Background:
- Remodeling and spacing factor 1 (RSF1) is a chromatin remodeler implicated in DNA damage response (DDR) and repair.
- The in vivo consequences of RSF1 deficiency in DDR and its underlying molecular mechanisms are not fully understood.
- Defective DDR is associated with neuropathological conditions.
Purpose of the Study:
- To investigate the biological role of RSF1 in the DNA damage response in vivo.
- To elucidate the molecular mechanisms by which RSF1 influences cellular integrity following DNA damage.
Main Methods:
- Development of neural-specific Rsf1 knockout mice.
- Analysis of neural apoptosis and cell death in RSF1-deficient models after DNA damage induction.
- Global transcriptome analysis of RSF1-deficient human cell lines.
- Investigation of p53/p300 complex binding and H3 acetylation at target gene promoters.
Main Results:
- RSF1 deficiency did not cause neuropathological abnormalities but protected against neural apoptosis during neurogenesis.
- RSF1-deficient cells exhibited significantly reduced cell death upon DNA damage.
- Global transcriptome analysis revealed reduced expression of p53 downstream genes in RSF1-deficient cells after DNA breaks.
- Inactivation of p53 target genes was linked to decreased p53/p300 complex binding and reduced H3 acetylation at their promoters.
Conclusions:
- RSF1 is essential for p53-dependent gene expression in response to DNA strand breaks.
- RSF1 facilitates the accessibility of the p53/p300 complex to its target genes.
- RSF1 plays a critical role in maintaining cellular integrity by modulating the DNA damage response pathway.
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