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Related Concept Videos

Catalytically Perfect Enzymes01:07

Catalytically Perfect Enzymes

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The theory of catalytically perfect enzymes was first proposed by W.J. Albery and J. R. Knowles in 1976. These enzymes catalyze biochemical reactions at high-speed. Their catalytic efficiency values range from 108-109 M-1s-1. These enzymes are also called 'diffusion-controlled' as the only rate-limiting step in the catalysis is that of the substrate diffusion into the active site. Examples include triose phosphate isomerase, fumarase, and superoxide dismutase.
 
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Enzymes02:34

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Inside living organisms, enzymes act as catalysts for many biochemical reactions involved in cellular metabolism. The role of enzymes is to reduce the activation energies of biochemical reactions by forming complexes with its substrates. The lowering of activation energies favor an increase in the rates of biochemical reactions.
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Enzymes and Activation Energy01:13

Enzymes and Activation Energy

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The activation energy (or free energy of activation), abbreviated as Ea, is the small amount of energy input necessary for all chemical reactions to occur. During chemical reactions, certain chemical bonds break, and new ones form. For example, when a glucose molecule breaks down, bonds between the molecule's carbon atoms break. Since these are energy-storing bonds, they release energy when broken. However, the molecule must be somewhat contorted to get into a state that allows the bonds to...
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Classifying Matter by State02:49

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Chemistry is the study of matter and the changes it undergoes. Matter is anything that has mass and occupies space. Matter is all around us; the air, water, soil, mountains, even our bodies are all examples of matter. Matter is divided into three states — solid, liquid, and gas — that are commonly found on earth. The fourth state of matter, plasma, occurs naturally in the interiors of stars. 
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Classifying Matter by Composition03:35

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Matter: Pure Substances and Mixtures
According to its composition, the matter can be classified into two broad categories — pure substances and mixtures. 
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Physical and Chemical Properties of Matter02:57

Physical and Chemical Properties of Matter

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The characteristics that enable us to distinguish one substance from another are called properties.
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Updated: Feb 3, 2026

Modeling an Enzyme Active Site using Molecular Visualization Freeware
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Modeling an Enzyme Active Site using Molecular Visualization Freeware

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Catalytic enzymes are active matter.

Ah-Young Jee1, Yoon-Kyoung Cho1,2, Steve Granick3,4,5

  • 1Center for Soft and Living Matter, Institute for Basic Science, Ulsan 44919, South Korea.

Proceedings of the National Academy of Sciences of the United States of America
|November 3, 2018
PubMed
Summary
This summary is machine-generated.

Enzymes are active matter, exhibiting enhanced motion and superdiffusive behavior due to catalysis. This reaction-motion coupling, demonstrated experimentally, challenges classical paradigms in biochemistry and opens new technological avenues.

Keywords:
active mattercatalytically induced mobilitychemotaxisenzymefluorescence correlation spectroscopy

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High-throughput Fluorometric Measurement of Potential Soil Extracellular Enzyme Activities

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Area of Science:

  • Biophysics
  • Chemical Physics
  • Biochemistry

Background:

  • Enzymes are traditionally viewed as catalysts, separate from motility.
  • Classical models do not account for enzyme motion driven by catalytic activity.

Purpose of the Study:

  • To investigate the physical nature of enzyme activity beyond catalysis.
  • To determine if enzyme catalysis influences enzyme motion and explore potential coupling mechanisms.

Main Methods:

  • Microscopic theory combined with superresolution fluorescence microscopy.
  • Experiments conducted across four orders of magnitude of substrate concentration, focusing on the Michaelis-Menten constant regime.
  • Analysis of enzyme trajectories and motion characteristics.

Main Results:

  • Enzyme catalysis induces superdiffusive motion for short durations (microseconds).
  • Catalysis enhances effective enzyme diffusivity over longer timescales.
  • Enzymes exhibit antichemotaxis, moving away from substrate-rich regions.
  • Catalysis generates piconewton forces and performs work against viscosity.

Conclusions:

  • Enzymes function as active matter, coupling chemical reactions with motility.
  • Findings challenge the distinct separation of reaction and motion in classical enzyme kinetics.
  • Reaction-motion coupling may be a general principle in catalysis with significant biological and technological implications.