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Updated: Feb 3, 2026

Purification of Ubiquitinated p53 Proteins from Mammalian Cells
Published on: March 21, 2022
KDM5A Regulates a Translational Program that Controls p53 Protein Expression
Dongli Hu1, Carolyn Jablonowski1, Pei-Hsin Cheng1
1Department of Surgery, St Jude Children's Research Hospital, 262 Danny Thomas Place, Memphis, TN 38105, USA.
Abstract:
The p53 tumor suppressor pathway is frequently inactivated in human cancers. However, there are some cancer types without commonly recognized alterations in p53 signaling. Here we report that histone demethylase KDM5A is involved in the regulation of p53 activity. KDM5A is significantly amplified in multiple types of cancers, an event that tends to be mutually exclusive to p53 mutation. We show that KDM5A acts as a negative regulator of p53 signaling through inhibition of p53 translation via suppression of a subgroup of eukaryotic translation initiation genes. Genetic deletion of KDM5A results in upregulation of p53 in multiple lineages of cancer cells and inhibits tumor growth in a p53-dependent manner. In addition, we have identified a regulatory loop between p53, miR-34, and KDM5A, whereby the induction of miR-34 leads to suppression of KDM5A. Thus, our findings reveal a mechanism by which KDM5A inhibits p53 translation to modulate cancer progression.
Insights
Histone demethylase KDM5A negatively regulates the p53 tumor suppressor pathway by inhibiting p53 translation. Its amplification in cancers is mutually exclusive to p53 mutations, suggesting KDM5A as a potential therapeutic target.
Area of Science:
- Oncology
- Molecular Biology
- Epigenetics
Background:
- The p53 tumor suppressor pathway is crucial for preventing cancer but is inactivated in many human cancers.
- Some cancer types lack common p53 signaling alterations, indicating alternative regulatory mechanisms.
- Histone demethylase KDM5A emerges as a key player in regulating p53 activity.
Purpose of the Study:
- To investigate the role of histone demethylase KDM5A in p53 pathway regulation.
- To explore the relationship between KDM5A amplification, p53 mutation status, and cancer progression.
- To elucidate the mechanism by which KDM5A affects p53 activity and cancer growth.
Main Methods:
- Analysis of KDM5A amplification in various cancer types.
- Assessment of KDM5A's impact on p53 translation and activity.
- Genetic deletion of KDM5A in cancer cell lines.
- Investigation of the regulatory loop involving p53, miR-34, and KDM5A.
Main Results:
- KDM5A is significantly amplified in multiple cancers, often mutually exclusive to p53 mutations.
- KDM5A inhibits p53 translation by suppressing eukaryotic translation initiation genes.
- KDM5A deletion upregulates p53 and suppresses tumor growth in a p53-dependent manner.
- A regulatory loop exists where miR-34 induction suppresses KDM5A.
Conclusions:
- KDM5A acts as a negative regulator of p53 by inhibiting its translation.
- KDM5A amplification represents an alternative mechanism of p53 pathway inactivation in cancer.
- The p53-miR-34-KDM5A axis offers novel insights into cancer progression and potential therapeutic strategies.
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