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Novel case of neurodegeneration with brain iron accumulation 4 (NBIA4) caused by a pathogenic variant affecting
Peter Sparber1, Andrey Marakhonov2,3, Alexandra Filatova2
1Research Centre for Medical Genetics Moskvorechie 1, Moscow, Russia, 115522. psparber93@gmail.com.
Abstract:
Neurodegeneration with brain iron accumulation type 4 (NBIA4) also known as MPAN (mitochondria protein-associated neurodegeneration) is a rare neurological disorder which main feature is brain iron accumulation most frequently in the globus pallidus and substantia nigra. Whole exome sequencing (WES) in a 12-year-old patient revealed 2 variants in the C19orf12 gene, a previously reported common 11 bp deletion c.204_214del11, p.(Gly69Argfs*10) and a novel splicing variant c.193+5G>A. Functional analysis of novel variant showed skipping of the second exon, resulting in a formation of a truncated nonfunctional protein. This is the first functionally annotated pathogenic splicing variant in NBIA4.
Insights
Neurodegeneration with brain iron accumulation type 4 (NBIA4), or MPAN, is a rare neurological disorder. Researchers identified a novel splicing variant in the C19orf12 gene, confirming its role in NBIA4 pathogenesis.
Area of Science:
- Genetics
- Neuroscience
- Molecular Biology
Background:
- Neurodegeneration with brain iron accumulation type 4 (NBIA4), also known as mitochondria protein-associated neurodegeneration (MPAN), is a rare genetic disorder characterized by iron buildup in the brain.
- Iron accumulation typically affects the globus pallidus and substantia nigra, leading to progressive neurological decline.
Observation:
- Whole exome sequencing (WES) was performed on a 12-year-old patient diagnosed with NBIA4.
- The analysis identified two variants in the C19orf12 gene: a known deletion and a novel splicing variant (c.193+5G>A).
Findings:
- Functional analysis of the novel c.193+5G>A splicing variant demonstrated exon skipping.
- This resulted in the production of a truncated and nonfunctional C19orf12 protein.
- This represents the first functionally validated pathogenic splicing variant associated with NBIA4.
Implications:
- The identification of this novel splicing variant expands the mutational spectrum for NBIA4.
- This finding aids in understanding the molecular mechanisms underlying MPAN.
- It provides a basis for improved genetic diagnosis and potential therapeutic strategies for NBIA4 patients.
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