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Updated: Feb 3, 2026

Development of a Quantitative Recombinase Polymerase Amplification Assay with an Internal Positive Control
Published on: March 30, 2015
Development of a universal internal positive control.
1Counterterrorism & Forensic Science Research Unit, Laboratory Division, Federal Bureau of Investigation, 2501 Investigation Parkway, Quantico, VA 22135, USA.
A novel, synthetic internal positive control (IPC) offers robust quality control for molecular assays. This versatile tool is specific, sensitive to inhibitors, and adaptable across various amplification techniques.
Area of Science:
- Molecular Biology
- Biotechnology
- Analytical Chemistry
Background:
- Accurate quantification and detection in molecular assays rely on effective quality control measures.
- Existing internal positive controls (IPCs) may present limitations in specificity, adaptability, or synthetic design.
Purpose of the Study:
- To develop and characterize a novel, fully synthetic, exogenous internal positive control (IPC) for molecular amplification assays.
- To assess the specificity, sensitivity to inhibition, and adaptability of the designed IPC.
Main Methods:
- Rational design and synthesis of a novel exogenous internal positive control (IPC).
- Evaluation of IPC amplification efficiency and specificity using qPCR assays.
- Testing IPC cross-reactivity against human and various non-human DNA samples.
- Assessment of IPC sensitivity to common amplification inhibitors.
Main Results:
- The synthetic IPC demonstrated efficient amplification, suitable for use alone or in multiplex (triplex) qPCR reactions.
- No cross-reactivity was observed with human DNA or numerous tested non-human DNA samples, confirming high specificity.
- The IPC was sensitive to inhibition by at least four common amplification inhibitors, indicating its utility as a reaction quality indicator.
Conclusions:
- The developed synthetic exogenous IPC provides a robust and versatile solution for quality control in molecular assays.
- Its design ensures specificity, sensitivity to inhibition, and broad applicability, potentially including qPCR, PCR, and RT-PCR.
- This novel IPC enhances the reliability and accuracy of molecular diagnostic and research applications.
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