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Updated: Feb 2, 2026

Conventional BODIPY Conjugates for Live-Cell Super-Resolution Microscopy and Single-Molecule Tracking
Published on: June 8, 2020
Nonradiative Decay Channels for a Structurally-Distorted, Monostrapped BODIPY Derivative.
Dumitru Sirbu1, Joshua K G Karlsson1, Anthony Harriman1
1Molecular Photonics Laboratory, School of Natural and Environmental Sciences, Bedson Building , Newcastle University , Newcastle upon Tyne NE1 7RU , United Kingdom.
This study details a novel boron dipyrromethene (BODIPY) derivative whose fluorescence properties are sensitive to viscosity and temperature. It functions as a fluorescent rotor for rheology and exhibits unique temperature-dependent behavior in amorphous solids.
Area of Science:
- Organic chemistry
- Photophysics
- Materials science
Background:
- Boron dipyrromethene (BODIPY) dyes are versatile fluorescent probes.
- Understanding structure-property relationships is crucial for designing advanced molecular sensors.
- Environmental factors like viscosity and temperature significantly influence fluorophore behavior.
Purpose of the Study:
- To synthesize and characterize a novel BODIPY derivative with a phenoxyl ring attached to the boron center.
- To investigate the photophysical properties of this distorted BODIPY derivative in solution and solid matrices.
- To explore its potential as a fluorescent rotor for sensing local rheology and its temperature-dependent behavior.
Main Methods:
- Synthesis of a unique BODIPY derivative.
- Steady-state and time-resolved fluorescence spectroscopy.
- Viscosity and temperature-dependent emission studies in solution and amorphous sugar matrix.
- Analysis of dual-exponential decay kinetics and radiationless decay channels.
Main Results:
- The synthesized BODIPY derivative exhibits structural distortion and geometrical perturbation upon excitation.
- Fluorescence quantum yield increases with solvent viscosity, indicating potential as a fluorescent rotor.
- Dual-exponential decay kinetics reveal E-type delayed fluorescence.
- Emission yield decreases with temperature in solution but increases in an amorphous sugar matrix.
- Two radiationless decay channels, one viscosity-dependent and one temperature-dependent, were identified.
Conclusions:
- The novel BODIPY derivative acts as an effective fluorescent rotor for monitoring local viscosity.
- A temperature-dependent conformational change leads to altered photophysical properties in amorphous environments.
- The study provides insights into designing BODIPY-based sensors with tailored responses to environmental stimuli.
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