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Fully Automatic Brain Tumor Segmentation using End-To-End Incremental Deep Neural Networks in MRI images.

Mostefa Ben Naceur1, Rachida Saouli2, Mohamed Akil3

  • 1Smart Computer Sciences Laboratory, Department of Computer Sciences, University of Biskra, Biskra, Algeria; Gaspard Monge Computer Science Laboratory, ESIEE-Paris, University Paris-Est Marne-la-Vallée, France.

Computer Methods and Programs in Biomedicine
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Summary
This summary is machine-generated.

This study introduces novel deep learning models for efficient brain tumor segmentation in MRI scans. The models achieve state-of-the-art results, aiding in faster clinical diagnosis and treatment planning.

Keywords:
Brain tumor segmentationConvolutional neural networksDeep learningFully automaticHyper-parametersTraining

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Area of Science:

  • Medical Imaging
  • Artificial Intelligence
  • Neuroscience

Background:

  • Efficient brain tumor segmentation in multi-sequence MR images is crucial for timely clinical diagnosis and treatment.
  • Glioblastomas present challenges due to their varied sizes, shapes, contrasts, and locations within the brain.

Purpose of the Study:

  • To develop novel deep learning models for the automatic segmentation of brain tumors, specifically Glioblastomas.
  • To improve the efficiency and accuracy of brain tumor segmentation compared to existing methods.

Main Methods:

  • Proposed three end-to-end Incremental Deep Convolutional Neural Networks (CNNs) models.
  • Employed Ensemble Learning for enhanced model efficiency.
  • Introduced a new training strategy to optimize hyper-parameters and accelerate training.

Main Results:

  • Achieved state-of-the-art performance on the BRATS-2017 dataset without post-processing.
  • Attained an average Dice score of 0.88 for complete brain tumor region segmentation.
  • Demonstrated rapid segmentation with an average processing time of 20.87 seconds using GPU implementation.

Conclusions:

  • The developed deep learning models are effective for accurate brain tumor segmentation.
  • These models can significantly reduce diagnostic time for physicians.
  • The proposed approach offers a promising tool for neuro-oncology.