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Updated: Feb 2, 2026

Automated Segmentation of Cortical Grey Matter from T1-Weighted MRI Images
Published on: January 7, 2019
T1 , T1 contrast, and Ernst-angle images of four rat-lung pathologies
Dean O Kuethe1,2, Jeremy M Hix2, Laura E Fredenburgh2,3
1ABQMR, Albuquerque, New Mexico.
Purpose:
To initiate the archive of relaxation-weighted images that may help discriminate between pulmonary pathologies relevant to acute respiratory distress syndrome. MRI has the ability to distinguish pathologies by providing a variety of different contrast mechanisms. Lungs have historically been difficult to image with MRI but image quality is sufficient to begin cataloging the appearance of pathologies in T1 - and T2 -weighted images. This study documents T1 and the use of T1 contrast with four experimental rat lung pathologies.
Methods:
Inversion-recovery and spoiled steady state images were made at 1.89 T to measure T1 and document contrast in rats with atelectasis, lipopolysaccharide-induced inflammation, ventilator-induced lung injury (VILI), and injury from saline lavage. Higher-resolution Ernst-angle images were made to see patterns of lung infiltrations.
Results:
T1 -weighted images showed minimal contrast between pathologies, similar to T1 -weighted images of other soft tissues. Images taken shortly after magnetization inversion and displayed with inverted contrast highlight lung pathologies. Ernst-angle images distinguish the effects of T1 relaxation and spin density and display distinctive patterns. T1 for pathologies were: atelectasis, 1.25 ± 0.046 s; inflammation from instillation of lipopolysaccharide, 1.24 ± 0.015 s; VILI, 1.55 ± 0.064 s (p = 0.0022 vs. normal lung); and injury from saline lavage, 1.90±0.080 s (p = 0.0022 vs. normal lung; p = 0.0079 vs. VILI). T1 of normal lung and erector spinae muscle were 1.25 ± 0.028 s and 1.02 ± 0.027 s, respectively (p = 0.0022).
Conclusions:
Traditional T1 -weighting is subtle. However, images made with inverted magnetization and inverted contrast highlight the pathologies and Ernst-angle images aid in distinguishing pathologies.
Insights
Magnetic resonance imaging (MRI) T1-weighted images can help identify lung pathologies like acute respiratory distress syndrome. Inverted contrast imaging and Ernst-angle images effectively highlight and distinguish these conditions in rats.
Area of Science:
- Medical Imaging
- Pulmonary Medicine
- Radiology
Background:
- Magnetic Resonance Imaging (MRI) offers diverse contrast mechanisms for distinguishing pathologies.
- Imaging the lungs with MRI has been challenging, but current techniques allow for cataloging pathologies in T1- and T2-weighted images.
- Acute Respiratory Distress Syndrome (ARDS) necessitates improved methods for pulmonary pathology discrimination.
Purpose of the Study:
- To create an archive of relaxation-weighted MRI images for differentiating pulmonary pathologies related to ARDS.
- To document T1 relaxation times and T1 contrast in experimental rat lung pathologies.
- To assess the utility of T1-weighted MRI in characterizing lung injury models.
Main Methods:
- Inversion-recovery and spoiled steady-state images were acquired at 1.89 T in rats.
- T1 values were measured in lungs with atelectasis, lipopolysaccharide-induced inflammation, ventilator-induced lung injury (VILI), and saline lavage injury.
- Higher-resolution Ernst-angle images were used to visualize infiltration patterns.
Main Results:
- T1-weighted images showed subtle contrast between pathologies.
- Inverted contrast imaging effectively highlighted lung pathologies.
- Ernst-angle images differentiated T1 relaxation and spin density effects, revealing distinct patterns.
- Significant differences in T1 values were observed for VILI and saline lavage injury compared to normal lung (p < 0.0022).
Conclusions:
- Traditional T1-weighting provides subtle contrast for lung pathologies.
- Inverted magnetization and contrast enhance the visualization of pathologies.
- Ernst-angle MRI sequences aid in distinguishing between different lung pathologies.
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