Related Experiment Video
Updated: Feb 2, 2026

08:53
Assay to Measure Nucleocytoplasmic Transport in Real Time within Motor Neuron-like NSC-34 Cells
Published on: May 16, 2017
9.2K
Fluorescence-based quantification of nucleocytoplasmic transport.
Joshua B Kelley1, Bryce M Paschal2
1Department of Molecular and Biomedical Sciences, University of Maine, United States.
Methods (San Diego, Calif.)
|November 13, 2018
Summary
Studying protein localization in eukaryotic cells requires careful consideration of nuclear transport. This guide offers technical insights and quantification methods using fluorescence microscopy and ImageJ for analyzing protein distribution.
Area of Science:
- Cell Biology
- Molecular Biology
- Biophysics
Background:
- Eukaryotic cells sequester DNA in a nucleus, restricting DNA replication and transcription internally.
- Regulation of nuclear events depends on cytoplasmic processes like protein synthesis and signal transduction.
- Nuclear transport is crucial for diverse cellular activities, necessitating study of protein localization.
Purpose of the Study:
- To present technical considerations for studying nuclear and cytoplasmic protein localization.
- To provide guidance on quantifying protein levels using fluorescence microscopy and ImageJ software.
- To discuss the application of regions of interest and image segmentation for accurate protein localization quantification.
Main Methods:
- Utilizing fluorescence microscopy for visualizing protein distribution.
- Employing ImageJ software for quantitative analysis of protein levels.
- Implementing regions of interest and image segmentation for precise localization measurements.
Main Results:
- Detailed technical considerations for studying protein localization are presented.
- A methodological framework for quantifying protein levels in the nucleus and cytoplasm is provided.
- The utility of ImageJ software and specific image analysis techniques for localization studies is demonstrated.
Conclusions:
- Understanding nucleocytoplasmic transport is vital for controlling nuclear and cytoplasmic protein activity and levels.
- Quantitative analysis of protein localization offers critical insights into cellular function and biological output.
- The presented methods enhance the ability to study protein localization in eukaryotic cells.
Related Concept Videos
Facilitated Transport
148.1K
The chemical and physical properties of plasma membranes cause them to be selectively permeable. Since plasma membranes have both hydrophobic and hydrophilic regions, substances need to be able to transverse both regions. The hydrophobic area of membranes repels substances such as charged ions. Therefore, such substances need special membrane proteins to cross a membrane successfully. In facilitated transport, also known as facilitated diffusion, molecules and ions travel across a...
148.1K
Regulated mRNA Transport
7.0K
In eukaryotes, transcription and translation are compartmentalized; an mRNA is first synthesized in the nucleus and then selectively transported to the cytoplasm for protein synthesis. Before transport, a pre-mRNA undergoes several steps of post-transcriptional modifications including splicing, 5' capping, and the addition of a poly-adenine tail. Various proteins bind to the pre-mRNA during these modifications. The mRNA transport takes place with the help of multiple proteins playing...
7.0K
Primary Active Transport
198.5K
In contrast to passive transport, active transport involves a substance being moved through membranes in a direction against its concentration or electrochemical gradient. There are two types of active transport: primary active transport and secondary active transport. Primary active transport utilizes chemical energy from ATP to drive protein pumps that are embedded in the cell membrane. With energy from ATP, the pumps transport ions against their electrochemical gradients—a direction...
198.5K
Secondary Active Transport
137.9K
One example of how cells use the energy contained in electrochemical gradients is demonstrated by glucose transport into cells. The ion vital to this process is sodium (Na+), which is typically present in higher concentrations extracellularly than in the cytosol. Such a concentration difference is due, in part, to the action of an enzyme “pump” embedded in the cellular membrane that actively expels Na+ from a cell. Importantly, as this pump contributes to the high concentration of...
137.9K
Phloem and Sugar Transport
40.0K
Like many living organisms, plants have tissues that specialize in specific plant functions. For example, shoots are well adapted to rapid growth, while roots are structured to acquire resources efficiently. However, sugar production is primarily restricted to the photosynthetic cells that reside in the leaves of angiosperm plants. Sugar and other resources are transported from photosynthetic tissues to other specialized tissues by a process called translocation.
40.0K
Electron Transport Chains
112.2K
The final stage of cellular respiration is oxidative phosphorylation that consists of two steps: the electron transport chain and chemiosmosis. The electron transport chain is a set of proteins found in the inner mitochondrial membrane in eukaryotic cells. Its primary function is to establish a proton gradient that can be used during chemiosmosis to produce ATP and generate electron carriers, such as NAD+ and FAD, that are used in glycolysis and the citric acid cycle.
The ETC is comprised of...
The ETC is comprised of...
112.2K

